mTOR kinase structure, mechanism and regulation

Haijuan Yang1, Derek G Rudge, Joseph D Koos

  • 1Structural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, New York 10065, USA.

Nature
|May 3, 2013
PubMed

Insights

The mammalian target of rapamycin (mTOR) kinase structure reveals an intrinsically active conformation. Its activity is regulated by restricted active site access, controlled by the FRB domain and an inhibitory helix.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Structural Biology

Background:

  • The mammalian target of rapamycin (mTOR) is a key regulator of cell growth, frequently dysregulated in cancer.
  • Understanding mTOR's structure and regulation is crucial for developing targeted cancer therapies.

Purpose of the Study:

  • To elucidate the co-crystal structures of a truncated mTOR-mLST8 complex.
  • To investigate the structural basis of mTOR activation and inhibition.

Main Methods:

  • Co-crystal structure determination of mTOR-mLST8 complex with ATP transition state mimic and inhibitors.
  • In vitro biochemical assays to study substrate access and inhibition mechanisms.

Main Results:

  • The mTOR kinase exhibits an intrinsically active conformation with a recessed active site.
  • The FKBP12-rapamycin-binding (FRB) domain acts as a gatekeeper, regulating substrate access.
  • Rapamycin-FKBP12 inhibits mTOR by blocking substrate recruitment and restricting active-site access.
  • mTOR-activating mutations affect the structural framework controlling active site access.

Conclusions:

  • mTOR's kinase activity is tightly regulated by restricted access to its active site.
  • The FRB domain plays a critical role in substrate recognition and mTOR regulation.
  • Structural insights provide a basis for understanding mTOR inhibitor potency and specificity.

Related Concept Videos

Protein Kinases and Phosphatases02:54

Protein Kinases and Phosphatases

Proteins undergo chemical modifications that trigger changes in the charge, structure, and conformation of the proteins. Phosphorylation, acetylation, glycosylation, nitrosylation, ubiquitination, lipidation, methylation, and proteolysis are various protein modifications that regulate protein activity. Such modifications are usually enzyme-driven.
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
15.6K
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...
5.1K
Receptor Tyrosine Kinases01:26

Receptor Tyrosine Kinases

Receptor tyrosine kinases or RTKs are membrane-bound receptors that phosphorylate specific tyrosine on protein substrates. RTKs regulate cellular growth, differentiation, survival, and migration. They contain an extracellular ligand binding domain, a transmembrane domain, and a cytosolic tail with intrinsic kinase activity. Several extracellular signaling molecules activate RTKs in one or more ways and relay the signal downstream. Ligands such as platelet-derived growth factor (PDGF) or...
20.9K
MAPK Signaling Cascades01:07

MAPK Signaling Cascades

Mitogen-activated protein kinase, or MAPK pathway, activates three sequential kinases to regulate cellular responses such as proliferation, differentiation, survival, and apoptosis. The canonical MAPK pathway starts with a mitogen or growth factor binding to an RTK. The activated RTKs stimulate Ras, which recruits Raf or MAP3 Kinase (MAPKKK), the first kinase of the MAPK signaling cascade. Raf further phosphorylates and activates MEK or MAP2 Kinases (MAPKK), which in turn phosphorylates MAP...
9.3K
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a...
6.4K
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

No description available
1.7K