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Hypocretin (orexin) neuropeptide precursor gene, HCRT, polymorphisms in early-onset narcolepsy with cataplexy
Xiao Song Dong1, Su Fang Ma, Chun Wei Cao
1Department of Pulmonary Medicine, Beijing University People's Hospital, Beijing, China.
Insights
Genetic analysis of the hypocretin (orexin) precursor gene (HCRT) in children with narcolepsy identified novel mutations. Two specific HCRT gene mutations were found only in affected children but are unlikely to cause functional changes.
Area of Science:
- Genetics
- Neuroscience
- Sleep Medicine
Background:
- Narcolepsy with cataplexy is a rare neurological disorder.
- The hypocretin (orexin) system is implicated in sleep-wake regulation.
- Genetic factors may contribute to early-onset narcolepsy.
Purpose of the Study:
- To investigate mutations in the hypocretin (orexin) neuropeptide precursor (HCRT) gene in young children with narcolepsy and cataplexy.
- To determine if HCRT gene variations are associated with the development of early-onset narcolepsy.
Main Methods:
- Sequencing of the entire HCRT gene and its promoter region in 181 patients and 153 controls.
- Further sequencing of exon 2, containing identified nonsynonymous changes, in an additional 298 early-onset subjects and 148 controls.
- Analysis of single nucleotide polymorphisms (SNPs) and their segregation in affected families.
Main Results:
- Nine rare novel polymorphisms and one common polymorphism (rs760282) were identified in HCRT, with no significant differences between patients and controls.
- Two novel nonsynonymous substitutions in exon 2 (+977 H54A, +979 G55R) were found exclusively in two patients with early-onset narcolepsy.
- A third substitution (+1019 K68R) was found in both patients and controls, with segregation observed from unaffected parents to offspring for two of the three nonsynonymous SNPs.
Conclusions:
- Novel nonsynonymous substitutions in the HCRT gene were identified in patients with early-onset narcolepsy.
- Two of these substitutions were specific to narcolepsy patients but are unlikely to be functionally significant.
- The study suggests that these specific HCRT mutations may not be the primary cause of narcolepsy with cataplexy in young children, especially in heterozygous individuals.
Background:
To test if the hypocretin (orexin) neuropeptide precursor (HCRT) gene, HCRT, mutations are implicated in the development of narcolepsy with cataplexy deficiency in young children.
Methods:
The entire HCRT gene and ~2000 bp promoter region was first sequenced in 181 patients and 153 controls, and rare polymorphisms including three nonsynonymous amino acid changes were identified. Next the 557 bp region of exon 2 harboring the three nonsynonymous changes was sequenced in an additional 298 early-onset subjects and in 148 control samples.
Results:
A previously known common polymorphism (rs760282) and nine rare novel polymorphisms were identified in subjects and controls without significant differences. Two nonsynonymous exon 2 substitutions (+977 H54A, +979 G55R) were detected in two subjects with early onset at 7 and 6 years, respectively, but were not found in any controls. These substitutions are not likely to vastly change peptide binding to hypocretin receptors. One additional exon 2 substitution (+1019, K68R) was found in two patients and one control. Additional sequencing that focused on exon 2 showed additional subjects and controls with the +1019 K68R polymorphism and without significant differences between the subjects and the control. Segregation of two of these three nonsynonymous single nucleotide polymorphisms (SNPs) were observed from unaffected parents to offspring.
Conclusions:
Sequencing of a large number of early-onset narcolepsy subjects revealed three novel nonsynonymous substitutions within the preprohypocretin protein, two of which were only found in patients with early-onset narcolepsy but are not likely to be functionally significant, especially in heterozygote subjects.
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