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Updated: May 11, 2026

Isolation of Translating Ribosomes Containing Peptidyl-tRNAs for Functional and Structural Analyses
Published on: February 25, 2011
The bacterial translocon SecYEG opens upon ribosome binding
Denis G Knyazev1, Alexander Lents, Eberhard Krause
1Institute of Biophysics, Johannes Kepler University Linz, A-4020 Linz, Austria.
Ribosome binding to the SecYEG channel triggers its opening for protein translocation. This suggests a closed conformation is essential to prevent lethal proton leakage during post-translational processes.
Area of Science:
- Molecular biology
- Protein translocation
- Membrane protein complexes
Background:
- Co-translational translocation involves ribosome and SecYEG complex alignment.
- A signal is needed to displace the SecYEG sealing plug for nascent chain entry.
- The mechanism of SecYEG channel opening remains unidentified.
Purpose of the Study:
- To investigate the trigger for SecYEG channel opening.
- To characterize the functional properties of the SecYEG channel upon ribosome binding.
- To understand the conformational states of SecYEG during protein translocation.
Main Methods:
- Purification and reconstitution of the SecYEG channel.
- Planar lipid bilayer reconstitution assays.
- Ion conductivity measurements.
- Fluorescence correlation spectroscopy (FCS) for proteoliposome analysis.
Main Results:
- Ribosome binding induces a conformational transition in the SecYEG channel.
- The SecYEG channel opens to form a large ion-conducting pore upon ribosome interaction.
- The ion conductivity matches that of a plug deletion mutant.
- The open probability of the SecYEG channel is close to unity when bound to a ribosome.
- A closed post-translational conformation is proposed to prevent proton leak.
Conclusions:
- Ribosome binding is the trigger for SecYEG channel opening during co-translational translocation.
- The SecYEG channel exists in a highly conductive open state when interacting with ribosomes.
- A closed, post-translational conformation is critical for cellular viability by preventing proton leakage.
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