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Updated: May 11, 2026

Evaluation of Antimicrobial Activities of Nanoparticles and Nanostructured Surfaces In Vitro
Published on: April 21, 2023
In-vitro archaeacidal activity of biocides against human-associated archaea
Saber Khelaifia1, Jean Michel Brunel, Jean Brunel Michel
1Aix Marseille Université, URMITE, UMR63 CNRS 7278, IRD 198, Inserm 1095, Marseille, France.
Background:
Several methanogenic archaea have been detected in the human intestinal microbiota. These intestinal archaea may contaminate medical devices such as colonoscopes. However, no biocide activity has been reported among these human-associated archaea.
Methodology:
The minimal archaeacidal concentration (MAC) of peracetic acid, chlorhexidine, squalamine and twelve parent synthetic derivatives reported in this study was determined against five human-associated methanogenic archaea including Methanobrevibacter smithii, Methanobrevibacter oralis, Methanobrevibacter arboriphilicus, Methanosphaera stadtmanae, Methanomassiliicoccus luminyensis and two environmental methanogens Methanobacterium beijingense and Methanosaeta concilii by using a serial dilution technique in Hungates tubes.
Principal Findings:
MAC of squalamine derivative S1 was 0.05 mg/L against M. smithii strains, M. oralis, M. arboriphilicus, M. concilii and M. beijingense whereas MAC of squalamine and derivatives S2-S12 varied from 0.5 to 5 mg/L. For M. stadtmanae and M. luminyensis, MAC of derivative S1 was 0.1 mg/L and varied from 1 to ≥ 10 mg/L for squalamine and its parent derivatives S2-S12. Under the same experimental conditions, chlorhexidine and peracetic acid lead to a MAC of 0.2 and 1.5 mg/L, respectively against all tested archaea.
Conclusions/Significance:
Squalamine derivative S1 exhibited a 10-200 higher archaeacidal activity than other tested squalamine derivatives, on the majority of human-associated archaea. As previously reported and due to their week corrosivity and their wide spectrum of antibacterial and antifungal properties, squalamine and more precisely derivative S1 appear as promising compounds to be further tested for the decontamination of medical devices contaminated by human-associated archaea.
Insights
A novel squalamine derivative, S1, demonstrates potent archaeacidal activity against human-associated methanogenic archaea. This finding suggests S1
Area of Science:
- Microbiology
- Infectious Diseases
- Biochemistry
Background:
- Methanogenic archaea are present in the human gut microbiome.
- These archaea can potentially contaminate medical devices like colonoscopes.
- No prior biocide activity data exists for human-associated archaea.
Purpose of the Study:
- To determine the archaeacidal activity of squalamine and its derivatives against human-associated methanogenic archaea.
- To evaluate the potential of these compounds for medical device decontamination.
Main Methods:
- Minimal archaeacidal concentration (MAC) was determined for peracetic acid, chlorhexidine, squalamine, and 12 synthetic squalamine derivatives.
- Testing was conducted against five human-associated methanogenic archaea and two environmental methanogens.
- A serial dilution technique in Hungate tubes was employed.
Main Results:
- Squalamine derivative S1 showed significant archaeacidal activity, with MACs of 0.05 mg/L against most tested human-associated archaea.
- Other squalamine derivatives (S2-S12) and squalamine itself exhibited higher MACs, ranging from 0.5 to ≥10 mg/L.
- Chlorhexidine and peracetic acid had MACs of 0.2 and 1.5 mg/L, respectively.
Conclusions:
- Squalamine derivative S1 displayed 10-200 times higher archaeacidal activity compared to other tested squalamine derivatives.
- S1 is a promising candidate for further investigation in the decontamination of medical devices.
- Squalamine and its derivative S1 possess broad-spectrum antimicrobial properties and low corrosivity.
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