Inhibitors that stabilize a closed RAF kinase domain conformation induce dimerization

Hugo Lavoie1, Neroshan Thevakumaran, Gwenaëlle Gavory

  • 1Institute for Research in Immunology and Cancer, Laboratory of Intracellular Signalling, Université de Montréal, Montréal, Québec, Canada.

Insights

New biosensors detect RAF kinase dimerization, revealing how some inhibitors unexpectedly promote cancer cell growth by stabilizing kinase domains. This finding aids in developing targeted cancer therapies.

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Oncology

Background:

  • RAF kinases are crucial in cancer development and are activated through kinase domain dimerization.
  • Certain ATP-competitive RAF inhibitors paradoxically promote RAF dimerization and RAS/ERK pathway activation, leading to unwanted cell proliferation.
  • The precise mechanism behind inhibitor-induced RAF dimerization remains poorly understood.

Purpose of the Study:

  • To develop novel bioluminescence resonance energy transfer (BRET)-based biosensors for detecting RAF kinase dimerization in living cells.
  • To utilize these biosensors for profiling RAF kinase inhibitors and understanding their effects on dimerization.
  • To investigate the structural basis of RAF dimerization in vivo and its modulation by inhibitors.

Main Methods:

  • Development and application of BRET-based biosensors tailored for the extended RAF kinase family.
  • Live-cell imaging techniques to monitor RAF dimerization dynamics.
  • Inhibitor profiling assays to assess their impact on RAF dimerization and kinase activity.

Main Results:

  • Successfully established BRET biosensors capable of detecting RAF dimerization in real-time within living cells.
  • Demonstrated the utility of these biosensors in identifying inhibitors that selectively modulate RAF dimerization.
  • Provided insights into the structural mechanisms by which ATP-competitive inhibitors induce RAF dimerization, suggesting stabilization of a closed kinase domain conformation.
  • Observed that this dimerization mechanism may be generalizable to other allosterically regulated kinase families.

Conclusions:

  • BRET biosensors offer a powerful tool for studying RAF kinase dimerization and for the rational design of targeted cancer therapies.
  • Understanding inhibitor-induced dimerization is critical for avoiding paradoxical activation of cancer-promoting pathways.
  • The findings propose a generalizable model for allosteric regulation of kinase dimerization by ATP-competitive inhibitors.

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