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Published on: December 12, 2017
Structural analysis of the antibiotic-recognition mechanism of MarR proteins
Yu Ming Chang1, Cammy K M Chen, Tzu Ping Ko
1Institute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.
Abstract:
Staphylococci cause a wide range of diseases in humans and animals, and the proteins of the multiple antibiotic-resistance repressor (MarR) family in staphylococci function as regulators of protein expression and confer resistance to multiple antibiotics. Diverse mechanisms such as biofilm formation, drug transport, drug modification etc. are associated with this resistance. In this study, crystal structures of the Staphylococcus aureus MarR homologue SAR2349 and its complex with salicylate and the aminoglycoside antibiotic kanamycin have been determined. The structure of SAR2349 shows for the first time that a MarR protein can interact directly with different classes of ligands simultaneously and highlights the importance and versatility of regulatory systems in bacterial antibiotic resistance. The three-dimensional structures of TcaR from S. epidermidis in complexes with chloramphenicol and with the aminoglycoside antibiotic streptomycin were also investigated. The crystal structures of the TcaR and SAR2349 complexes illustrate a general antibiotic-regulated resistance mechanism that may extend to other MarR proteins. To reveal the regulatory mechanism of the MarR proteins, the protein structures of this family were further compared and three possible mechanisms of regulation are proposed. These results are of general interest because they reveal a remarkably broad spectrum of ligand-binding modes of the multifunctional MarR proteins. This finding provides further understanding of antimicrobial resistance mechanisms in pathogens and strategies to develop new therapies against pathogens.
Insights
Staphylococcal MarR proteins regulate antibiotic resistance by binding multiple drugs simultaneously. This study reveals novel binding modes, advancing our understanding of bacterial resistance mechanisms and new therapeutic strategies.
Area of Science:
- Microbiology
- Structural Biology
- Drug Resistance
Background:
- Staphylococci are significant pathogens causing diverse diseases in humans and animals.
- Multiple antibiotic-resistance repressor (MarR) family proteins in staphylococci regulate gene expression and confer antibiotic resistance.
- Antibiotic resistance mechanisms include biofilm formation and drug efflux pumps.
Purpose of the Study:
- To determine the crystal structures of Staphylococcus aureus MarR homologue SAR2349 and S. epidermidis TcaR.
- To investigate the interaction of these MarR proteins with various ligands, including antibiotics.
- To elucidate the regulatory mechanisms underlying bacterial antibiotic resistance conferred by MarR proteins.
Main Methods:
- X-ray crystallography was used to determine the three-dimensional structures of MarR proteins and their complexes.
- Comparative analysis of MarR protein structures was performed.
- Ligand-binding studies were conducted to understand interaction modes.
Main Results:
- The crystal structure of SAR2349 revealed simultaneous interaction with salicylate and kanamycin, demonstrating a novel ligand-binding capability.
- Structures of TcaR complexes with chloramphenicol and streptomycin were determined.
- A general antibiotic-regulated resistance mechanism involving MarR proteins was illustrated, potentially applicable to other MarR family members.
Conclusions:
- MarR proteins exhibit a broad spectrum of ligand-binding modes, highlighting their versatility in regulating bacterial responses.
- This research deepens the understanding of antimicrobial resistance mechanisms in pathogens.
- The findings offer insights for developing novel therapeutic strategies against staphylococcal infections.
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