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Updated: May 11, 2026

MicroRNA In situ Hybridization for Formalin Fixed Kidney Tissues
Published on: November 30, 2013
Epigenetic regulation of microRNA expression in renal cell carcinoma
Miriam Schiffgen1, Doris H Schmidt, Alexander von Rücker
1Klinik und Poliklinik für Urologie und Kinderurologie, Universitätsklinikum Bonn, Sigmund-Freud-Strasse 25, 53105 Bonn, Germany. miriam.schiffgen@gmx.de
Abstract:
The underlying mechanisms of microRNA deregulation in cancer cells include epigenetic modifications, which play a crucial role in carcinogenesis. We demonstrate that numerous microRNAs are induced in renal cell carcinoma cell lines after treatment with inhibitors of the DNA-methyltransferase (5-aza-2'-deoxycytidine) and the histone-deacetylase (suberoylanilide hydroxamic acid). We provide evidence that enrichment of H3 and H3K18 acetylation at the miR-9 promoter is causative for re-expression, while DNA hypermethylation remains unchanged. Our experiments show that the treatment with the epigenetic drugs causes re-expression of silenced microRNAs with putative tumor suppressive function in ccRCC cell lines.
Insights
Epigenetic drugs re-expressed silenced microRNAs in renal cell carcinoma. This suggests a therapeutic strategy targeting microRNA restoration for cancer treatment.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- MicroRNA deregulation is a hallmark of cancer, contributing to carcinogenesis.
- Epigenetic modifications, including DNA methylation and histone acetylation, are key mechanisms underlying microRNA dysregulation.
Purpose of the Study:
- To investigate the role of epigenetic modifications in microRNA deregulation in renal cell carcinoma (RCC).
- To determine if epigenetic drugs can restore the expression of silenced tumor-suppressive microRNAs in ccRCC cell lines.
Main Methods:
- Treatment of ccRCC cell lines with DNA-methyltransferase inhibitor (5-aza-2'-deoxycytidine) and histone-deacetylase inhibitor (suberoylanilide hydroxamic acid).
- Analysis of microRNA expression levels and epigenetic modifications at microRNA promoters (e.g., H3 and H3K18 acetylation, DNA methylation).
Main Results:
- Treatment with epigenetic drugs induced the expression of numerous microRNAs in ccRCC cell lines.
- Re-expression of miR-9 was associated with enrichment of H3 and H3K18 acetylation at its promoter, while DNA hypermethylation remained unchanged.
- Silenced microRNAs with potential tumor-suppressive functions were re-expressed following epigenetic drug treatment.
Conclusions:
- Epigenetic modifications, particularly histone acetylation, are crucial for the re-expression of silenced microRNAs in ccRCC.
- Epigenetic drug treatment can restore tumor-suppressive microRNA expression, offering a potential therapeutic avenue for ccRCC.
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