Epigenetic regulation of microRNA expression in renal cell carcinoma

Miriam Schiffgen1, Doris H Schmidt, Alexander von Rücker

  • 1Klinik und Poliklinik für Urologie und Kinderurologie, Universitätsklinikum Bonn, Sigmund-Freud-Strasse 25, 53105 Bonn, Germany. miriam.schiffgen@gmx.de

Insights

Epigenetic drugs re-expressed silenced microRNAs in renal cell carcinoma. This suggests a therapeutic strategy targeting microRNA restoration for cancer treatment.

Area of Science:

  • Oncology
  • Epigenetics
  • Molecular Biology

Background:

  • MicroRNA deregulation is a hallmark of cancer, contributing to carcinogenesis.
  • Epigenetic modifications, including DNA methylation and histone acetylation, are key mechanisms underlying microRNA dysregulation.

Purpose of the Study:

  • To investigate the role of epigenetic modifications in microRNA deregulation in renal cell carcinoma (RCC).
  • To determine if epigenetic drugs can restore the expression of silenced tumor-suppressive microRNAs in ccRCC cell lines.

Main Methods:

  • Treatment of ccRCC cell lines with DNA-methyltransferase inhibitor (5-aza-2'-deoxycytidine) and histone-deacetylase inhibitor (suberoylanilide hydroxamic acid).
  • Analysis of microRNA expression levels and epigenetic modifications at microRNA promoters (e.g., H3 and H3K18 acetylation, DNA methylation).

Main Results:

  • Treatment with epigenetic drugs induced the expression of numerous microRNAs in ccRCC cell lines.
  • Re-expression of miR-9 was associated with enrichment of H3 and H3K18 acetylation at its promoter, while DNA hypermethylation remained unchanged.
  • Silenced microRNAs with potential tumor-suppressive functions were re-expressed following epigenetic drug treatment.

Conclusions:

  • Epigenetic modifications, particularly histone acetylation, are crucial for the re-expression of silenced microRNAs in ccRCC.
  • Epigenetic drug treatment can restore tumor-suppressive microRNA expression, offering a potential therapeutic avenue for ccRCC.

Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
Epigenetic Regulation01:37

Epigenetic Regulation

Epigenetic changes alter the physical structure of the DNA without changing the genetic sequence and often regulate whether genes are turned on or off. This regulation ensures that each cell produces only proteins necessary for its function. For example, proteins that promote bone growth are not produced in muscle cells. Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
X-chromosome...
Epigenetic Regulation01:46

Epigenetic Regulation

Epigenetic mechanisms play an essential role in healthy development. Conversely, precisely regulated epigenetic mechanisms are disrupted in diseases like cancer.
mTOR Signaling and Cancer Progression03:03

mTOR Signaling and Cancer Progression

The mammalian target of rapamycin or mTOR protein was discovered in 1994 due to its direct interaction with rapamycin. The protein gets its name from a yeast homolog called TOR. The mTOR protein complex in mammalian cells plays a major role in balancing anabolic processes such as the synthesis of proteins, lipids, and nucleotides and catabolic processes, such as autophagy in response to environmental cues, such as availability of nutrients and growth factors.
The mTOR pathway or the...