Related Experiment Video
Updated: May 11, 2026

09:16
Analyzing Craniofacial Morphogenesis in Zebrafish Using 4D Confocal Microscopy
Published on: January 30, 2014
FishFace: interactive atlas of zebrafish craniofacial development at cellular resolution
B Frank Eames1, April DeLaurier, Bonnie Ullmann
1Institute of Neuroscience, University of Oregon, Eugene, OR, USA. b.frank@usask.ca
BMC Developmental Biology
|May 30, 2013
Summary
The Fish Face Atlas provides a 3D interactive view of zebrafish craniofacial development at cellular resolution. This resource aids understanding of skeletal anatomy, development, and evolution.
Area of Science:
- Developmental Biology
- Evolutionary Biology
- Anatomy
Background:
- Vertebrate craniofacial skeleton exhibits complexity and diversity.
- Understanding genesis and evolution requires cellular-resolution developmental programs.
- Existing resources lack integrated skeletal anatomy and cellular craniofacial development details.
Purpose of the Study:
- To create an online, 3D-interactive atlas of craniofacial development.
- To provide cellular-resolution insights into skeletal development.
- To offer analytical guidelines and suggest developmental mechanisms.
Main Methods:
- Developed the Fish Face Atlas using zebrafish (Danio rerio).
- Utilized Alizarin red-stained skulls and fluorescent optical projection tomography for 3D reconstruction.
- Integrated confocal microscopy of transgenic zebrafish to visualize cell types and morphogenesis.
Main Results:
- The atlas offers a 3D structural understanding of the zebrafish craniofacial skeleton.
- Detailed confocal images illustrate the appearance, morphogenesis, and growth of pharyngeal arch derivatives.
- High-magnification image stacks provide cellular detail for developmental and evolutionary hypotheses.
Conclusions:
- The FishFace Atlas is a novel learning tool for craniofacial skeletal development.
- Serves as a reference for comparative and mutational analyses.
- Facilitates understanding of developmental mechanisms and evolutionary insights.

