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Development and Maintenance of a Preclinical Patient Derived Tumor Xenograft Model for the Investigation of Novel Anti-Cancer Therapies
Published on: September 30, 2016
"Right drug for the right patient": hurdles and the path forward in colorectal cancer
1From the Department of Gastrointestinal Medical Oncology, Division of Cancer Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX.
Abstract:
Predictive biomarkers have been heralded as the way to develop the "right drug for the right patient." However, despite many studies incorporating novel biomarkers with targeted therapies, there has been little progress over the 5 years since the identification of KRAS mutations' ability to predict resistance to epidermal growth factor receptor (EGFR) monoclonal antibodies. Recently approved therapeutics (regorafenib, aflibercept) or label extensions for existing therapies (bevacizumab) lack companion biomarkers. The current model of biomarker development, "target-based biomarker" design, attempts to identify individual biomarkers that are closely tied to the activity of a particular treatment. There are several limitations to prospective utilization of predictive biomarkers in novel therapy development, including technical validation of the assay and the logistics of timely biomarker determination with available material that limit the options. Tumor heterogeneity, both between different regions in the tumor and as a result of changes induced over time and under the selective pressure of chemotherapy, can reduce the precision of biomarker determination. Biomarkers present in low frequencies are increasingly common in drug development and will require efficient screening infrastructure to be feasible. Although development efforts will continue in the current target-based biomarker model for the near future, it is increasingly apparent that a new model is needed. A "taxonomy-based biomarker" model has been proposed, which is less tied to novel drug development and instead attempts to classify individual tumors based on their intrinsic biology. This requires integrating multiple characteristics of the tumors, including gene mutations, amplifications, methylation, as well as RNA and protein expression. Identification of the taxonomy of colorectal cancer will then allow more efficient development of targeted agents that can leverage the distinct molecular vulnerabilities of the resulting subsets. A transition to a taxonomy-based biomarker model would provide the classification structure and biologic insights needed to advance the ultimate goal of the right drug for the right patient.
Insights
Predictive biomarkers are crucial for precision medicine but face challenges. A new taxonomy-based model classifying tumors by intrinsic biology offers a path forward for developing targeted therapies.
Area of Science:
- Oncology
- Translational Medicine
- Biomarker Discovery
Background:
- Predictive biomarkers aim to match patients with targeted therapies, but progress has been slow.
- Current targeted therapies often lack companion biomarkers, hindering personalized treatment.
- KRAS mutations predict resistance to EGFR monoclonal antibodies, yet this has not significantly advanced therapy development.
Purpose of the Study:
- To highlight the limitations of the current target-based biomarker model in drug development.
- To propose a new taxonomy-based biomarker model for classifying tumors based on intrinsic biology.
- To enable more efficient development of targeted agents by leveraging distinct molecular vulnerabilities.
Main Methods:
- Reviewing the challenges in current predictive biomarker development, including technical validation and tumor heterogeneity.
- Analyzing the limitations of the target-based biomarker approach.
- Proposing a shift towards a taxonomy-based model integrating multiple molecular characteristics.
Main Results:
- The target-based biomarker model faces significant hurdles, including assay validation, logistical issues, and tumor heterogeneity.
- Low-frequency biomarkers common in drug development require efficient screening infrastructure.
- A taxonomy-based model offers a more robust framework for classifying tumors and guiding targeted therapy development.
Conclusions:
- A transition to a taxonomy-based biomarker model is essential for advancing precision medicine.
- This new model integrates diverse molecular data to classify tumors, enabling targeted agent development.
- Implementing a taxonomy-based approach will provide the necessary classification and biological insights for the "right drug, right patient" goal.
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