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Updated: May 10, 2026

Analysis of Endocytic Uptake and Retrograde Transport to the Trans-Golgi Network Using Functionalized Nanobodies in Cultured Cells
Published on: February 21, 2019
The ALS8 protein VAPB interacts with the ER-Golgi recycling protein YIF1A and regulates membrane delivery into
Marijn Kuijpers1, Ka Lou Yu, Eva Teuling
1Division of Cell Biology, Department of Biology, Faculty of Science, Utrecht University, Utrecht, The Netherlands.
Abstract:
The vesicle-associated membrane protein (VAMP) associated protein B (VAPB) is an integral membrane protein localized to the endoplasmic reticulum (ER). The P56S mutation in VAPB has been linked to motor neuron degeneration in amyotrophic lateral sclerosis type 8 (ALS8) and forms ER-like inclusions in various model systems. However, the role of wild-type and mutant VAPB in neurons is poorly understood. Here, we identified Yip1-interacting factor homologue A (YIF1A) as a new VAPB binding partner and important component in the early secretory pathway. YIF1A interacts with VAPB via its transmembrane regions, recycles between the ER and Golgi and is mainly localized to the ER-Golgi intermediate compartments (ERGICs) in rat hippocampal neurons. VAPB strongly affects the distribution of YIF1A and is required for intracellular membrane trafficking into dendrites and normal dendritic morphology. When VAPB-P56S is present, YIF1A is recruited to the VAPB-P56S clusters and loses its ERGIC localization. These data suggest that both VAPB and YIF1A are important for ER-to-Golgi transport and that missorting of YIF1A may contribute to VAPB-associated motor neuron disease.
Insights
Vesicle-associated membrane protein B (VAPB) and Yip1-interacting factor homologue A (YIF1A) are crucial for neuronal transport. Mutant VAPB disrupts YIF1A localization, potentially causing motor neuron disease.
Area of Science:
- Neuroscience
- Cell Biology
- Molecular Biology
Background:
- Vesicle-associated membrane protein B (VAPB) is an ER-localized protein implicated in amyotrophic lateral sclerosis type 8 (ALS8).
- The function of wild-type and mutant VAPB in neuronal pathways remains largely unclear.
- Understanding VAPB's interactions is key to elucidating its role in neurodegeneration.
Purpose of the Study:
- To identify novel VAPB binding partners.
- To investigate the role of VAPB and its interaction with YIF1A in neuronal intracellular transport.
- To explore the impact of VAPB mutations on YIF1A localization and function.
Main Methods:
- Co-immunoprecipitation to identify VAPB binding partners.
- Confocal microscopy to analyze protein localization in rat hippocampal neurons.
- Analysis of dendritic morphology and intracellular trafficking.
Main Results:
- Yip1-interacting factor homologue A (YIF1A) was identified as a novel VAPB binding partner involved in the early secretory pathway.
- VAPB regulates YIF1A localization, recycling between the ER and Golgi, primarily in ER-Golgi intermediate compartments (ERGICs).
- The ALS8-associated VAPB-P56S mutation causes YIF1A mislocalization to VAPB clusters, disrupting ERGIC localization and affecting dendritic morphology.
Conclusions:
- Both VAPB and YIF1A are essential for ER-to-Golgi transport and neuronal structure.
- The mislocalization of YIF1A due to VAPB mutations may contribute to the pathogenesis of VAPB-associated motor neuron diseases.
- This study reveals a new mechanism involving VAPB and YIF1A in maintaining neuronal health and transport.
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