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SAR transfer across different targets.

Bijun Zhang1, Ye Hu, Jürgen Bajorath

  • 1LIMES Program Unit Chemical Biology and Medicinal Chemistry, Department of Life Science Informatics, Rheinische Friedrich-Wilhelms-Universität, Dahlmannstrasse 2, D-53113 Bonn, Germany.

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Summary
This summary is machine-generated.

This study introduces a novel method to detect series-based structure-activity relationship (S_SAR) transfer events in medicinal chemistry. Researchers identified numerous S_SAR transfer series across related targets, advancing our understanding of drug discovery principles.

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Area of Science:

  • Medicinal Chemistry
  • Computational Chemistry
  • Drug Discovery

Background:

  • Structure-activity relationship (SAR) transfer is crucial in medicinal chemistry but under-investigated.
  • Two types exist: target-based SAR (T_SAR) and series-based SAR (S_SAR) transfer.
  • S_SAR transfer, where analogs show similar potency changes across multiple targets, has not been systematically explored.

Purpose of the Study:

  • To develop and apply a computational approach for detecting S_SAR transfer events.
  • To systematically search public compound data for the occurrence of S_SAR transfer.
  • To characterize the identified S_SAR transfer series.

Main Methods:

  • Devised a computational method to identify S_SAR transfer.
  • Systematically searched public domain compound databases.
  • Analyzed identified series for structural diversity and potency progression.

Main Results:

  • Identified 63 S_SAR transfer series involving two targets and 26 involving three targets.
  • No series involving four targets were found.
  • Most S_SAR transfers occurred within G protein-coupled receptor (GPCR) subfamilies, not across different target families.

Conclusions:

  • S_SAR transfer events are detectable and occur across related targets, primarily within related protein families like GPCRs.
  • Identified series exhibit structural diversity but consistent potency progression across targets.
  • The findings provide valuable insights into SAR trends for drug discovery and are made publicly available.