Related Experiment Video
Updated: May 10, 2026

Multiplex PCR Assay for Typing of Staphylococcal Cassette Chromosome Mec Types I to V in Methicillin-resistant Staphylococcus aureus
Published on: September 5, 2013
Distinction of Staphylococcal Cassette Chromosome mec type V elements from Staphylococcus aureus ST398
Monika A Chlebowicz1, Thijs Bosch, Artur J Sabat
1Department of Medical Microbiology, University of Groningen and University Medical Center Groningen, Hanzeplein 1, P.O. Box 30001, 9700 RB Groningen, the Netherlands.
Abstract:
Methicillin resistant S. aureus (MRSA) is a major threat for human health and well-being. In recent years, it has become clear that livestock is a potential reservoir for MRSA, most livestock-associated isolates belonging to the ST398 lineage. Importantly, ST398 strains were also reported as causative agents of severe invasive infections in humans with no evidence for livestock associations. Here we document the sequence of the J1 region of the type V (5C2&5) SCCmec element and its right chromosomal junction in the clinical PVL-positive ST398 MRSA isolate UMCG-M4. Sequence comparisons show that this SCCmec element and related type V elements from other S. aureus isolates share a common core structure, but differ substantially in the so-called J1 region. Additional PCR analyses and typing studies indicate that the J1 region of strain UMCG-M4 is specific for SCCmec elements of PVL-positive ST398 isolates. Lastly, we show that the sequenced right chromosomal junction is invariant in strains of the ST398 lineage.
Insights
Livestock-associated Methicillin-resistant Staphylococcus aureus (MRSA) ST398 strains can cause severe human infections. This study details the specific J1 region of the SCCmec element in a clinical MRSA ST398 isolate, finding it unique to PVL-positive ST398 strains.
Area of Science:
- Microbiology
- Genomics
- Infectious Diseases
Background:
- Methicillin-resistant Staphylococcus aureus (MRSA) poses a significant global health threat.
- Livestock, particularly the ST398 lineage, serves as a reservoir for MRSA.
- ST398 strains are increasingly implicated in severe human infections, sometimes without clear livestock links.
Purpose of the Study:
- To characterize the J1 region of the type V SCCmec element and its chromosomal junction in a clinical PVL-positive ST398 MRSA isolate.
- To compare the J1 region with other type V SCCmec elements.
- To determine the specificity of the J1 region within the ST398 lineage.
Main Methods:
- Whole genome sequencing of the J1 region and chromosomal junction of the UMCG-M4 MRSA ST398 isolate.
- Sequence comparison analysis with other SCCmec elements.
- Polymerase Chain Reaction (PCR) and typing studies.
Main Results:
- The sequenced type V SCCmec element shares a common core structure with others but exhibits a distinct J1 region.
- The J1 region of the UMCG-M4 isolate is specific to SCCmec elements found in PVL-positive ST398 MRSA strains.
- The right chromosomal junction sequence is consistent across ST398 lineage strains.
Conclusions:
- The J1 region of SCCmec elements can be a distinguishing feature for specific MRSA lineages, such as PVL-positive ST398.
- Understanding SCCmec element variations aids in tracking MRSA transmission and evolution.
- The invariant chromosomal junction provides a stable marker for ST398 identification.
Related Concept Videos
Mechanism of Antibiotic Resistance in MRSA
Clinical Significance of Antibiotic Resistance
Staphylococcal Skin Infections
Bacterial Gastroenteritis
Bacterial Phylum Actinobacteria
Bacterial Phylum Verrucomicrobiota

