Related Experiment Video
Updated: May 10, 2026

Continuous Fluorescence-Based Endonuclease-Coupled DNA Methylation Assay to Screen for DNA Methyltransferase Inhibitors
Published on: August 5, 2022
[Dimeric bisberzimidazoles: cytotoxicity and effects on DNA methylation in normal and cancer human cells]
Abstract:
Cancer cells are characterized by the hypermethylation of promoter regions of tumor suppressor genes. DNA methyltransferase inhibitors cause re-activation of these genes that allows considering DNA methyltransferases as targets for anticancer therapy. As it was previously shown by us, dimeric bisbenzimidazoles, DB(n), differing in length of the oligomethylene linker between the two bisbenzimidazole fragments (n--number of methylene groups in linker) effectively inhibit the methylation of DNA duplexes by murine methyltransferase Dnmt3a. Here, the cytotoxicity of some of these compounds, their penetration into cells and influence on the methylation of genomic DNA in fetal lung fibroblasts line F-977 and cervical cancer cells HeLa have been studied. In the 0-60 microM concentration range, only the DB(11) displayed a significant toxic effect on the normal cells, whereas the effect of DB(n) investigated on the cancer cells was not significant. Interestingly, the DB(1) and DB(3) to a small extent stimulate the proliferation of HeLa and F-977 cells, respectively. DB(1) and DB(3) display ability to penetrate into the nucleus of HeLa and F-977 cells and accumulate in various parts of the nuclei. DB(11) is not able to penetrate into the nuclei of these cells. The incubation of F-977 cells with 26 microM of DB(1) or DB(3) led to a decrease of the methylation of 18S rRNA gene, which is located in the region of DB(1) and DB(3) accumulation. A similar effect produces the same concentration of DB (3) in the F-977 cells. However, the overall level of genomic DNA methylation was not changed. These data suggest that DB(n) can be directed to act on specific genes demethylation and in the future may selectively inhibit the proliferation of cancer cells.
Insights
Dimeric bisbenzimidazoles (DB(n)) show potential in cancer therapy by selectively demethylating specific genes. While some compounds stimulate cell proliferation, others target gene methylation within cancer cells, suggesting future applications in selective cancer treatment.
Area of Science:
- Biochemistry
- Molecular Biology
- Cancer Research
Background:
- Cancer cells exhibit hypermethylation of tumor suppressor gene promoters.
- DNA methyltransferase inhibitors reactivate these genes, making DNA methyltransferases therapeutic targets.
- Dimeric bisbenzimidazoles (DB(n)) inhibit DNA methylation by Dnmt3a.
Purpose of the Study:
- To investigate the cytotoxicity, cellular penetration, and genomic DNA methylation effects of DB(n) compounds in normal and cancer cells.
- To evaluate the potential of DB(n) as targeted anticancer agents.
Main Methods:
- Cytotoxicity assays on F-977 fibroblasts and HeLa cervical cancer cells.
- Cellular uptake and nuclear penetration studies using fluorescence microscopy.
- Analysis of genomic DNA methylation levels after DB(n) treatment.
Main Results:
- DB(11) showed significant toxicity to normal cells, while DB(n) compounds had non-significant effects on cancer cells.
- DB(1) and DB(3) penetrated cancer cell nuclei and decreased methylation of the 18S rRNA gene.
- Overall genomic DNA methylation levels remained unchanged, indicating specific gene targeting.
Conclusions:
- DB(n) compounds can selectively demethylate specific genes within cells.
- These compounds hold promise for future development as targeted anticancer therapies.
- Further research is needed to optimize DB(n) for selective cancer cell proliferation inhibition.
More Related Videos
13:47Enhanced Reduced Representation Bisulfite Sequencing for Assessment of DNA Methylation at Base Pair Resolution
Published on: February 24, 2015
10:26Toxicological Assays for Testing Effects of an Epigenetic Drug on Development, Fecundity and Survivorship of Malaria Mosquitoes
Published on: January 16, 2015
Related Concept Videos
Inhibitors of Bacterial DNA Synthesis
Abnormal Proliferation
Targeted Cancer Therapies
There are several types of targeted therapies against specific...
Inhibition of Cdk Activity
Epigenetic Regulation
X-chromosome...
Epigenetic Regulation