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Updated: May 10, 2026

A Mass Spectrometry-Based Approach to Identify Phosphoprotein Phosphatases and their Interactors
Published on: April 29, 2022
PPM1A is a RelA phosphatase with tumor suppressor-like activity
Abstract:
Nuclear factor-κB (NF-κB) signaling contributes to human disease processes, notably inflammatory diseases and cancer. NF-κB has a role in tumorigenesis and tumor growth, as well as promotion of metastases. Mechanisms responsible for abnormal NF-κB activation are not fully elucidated; however, RelA phosphorylation, particularly at serine residues S536 and S276, is critical for RelA function. Kinases that phosphorylate RelA promote oncogenic behaviors, suggesting that phosphatases targeting RelA could have tumor-inhibiting activities; however, few RelA phosphatases have been identified. Here, we identified tumor inhibitory and RelA phosphatase activities of the protein phosphatase 2C (PP2C) phosphatase family member, PPM1A. We show that PPM1A directly dephosphorylated RelA at residues S536 and S276 and selectively inhibited NF-κB transcriptional activity, resulting in decreased expression of monocyte chemotactic protein-1/chemokine (C-C motif) ligand 2 and interleukin-6, cytokines implicated in cancer metastasis. PPM1A depletion enhanced NF-κB-dependent cell invasion, whereas PPM1A expression inhibited invasion. Analyses of human expression data revealed that metastatic prostate cancer deposits had lower PPM1A expression compared with primary tumors without distant metastases. A hematogenous metastasis mouse model revealed that PPM1A expression inhibited bony metastases of prostate cancer cells after vascular injection. In summary, our findings suggest that PPM1A is a RelA phosphatase that regulates NF-κB activity and that PPM1A has tumor suppressor-like activity. Our analyses also suggest that PPM1A inhibits prostate cancer metastases and as neither gene deletions nor inactivating mutations of PPM1A have been described, increasing PPM1A activity in tumors represents a potential therapeutic strategy to inhibit NF-κB signaling or bony metastases in human cancer.
Insights
Protein phosphatase PPM1A dephosphorylates RelA, inhibiting NF-κB signaling and tumor growth. PPM1A suppresses prostate cancer metastasis, offering a potential therapeutic strategy for cancer treatment.
Area of Science:
- Molecular Biology
- Oncology
- Biochemistry
Background:
- Nuclear factor-κB (NF-κB) signaling is implicated in cancer and inflammation.
- RelA phosphorylation at serine residues S536 and S276 is crucial for NF-κB function and oncogenesis.
- Identifying phosphatases that target RelA is key to understanding tumor suppression.
Purpose of the Study:
- To identify and characterize novel RelA phosphatases with tumor-inhibiting activities.
- To investigate the role of PPM1A as a RelA phosphatase and its impact on NF-κB signaling.
- To evaluate PPM1A's potential as a therapeutic target for inhibiting cancer metastasis.
Main Methods:
- Biochemical assays to demonstrate PPM1A's direct dephosphorylation of RelA at S536 and S276.
- Assessment of NF-κB transcriptional activity and downstream cytokine expression (MCP-1, IL-6).
- In vitro cell invasion assays and in vivo mouse models of prostate cancer metastasis.
Main Results:
- PPM1A directly dephosphorylates RelA at S536 and S276, inhibiting NF-κB activity.
- PPM1A expression reduces pro-metastatic cytokine expression and inhibits cancer cell invasion.
- Lower PPM1A expression correlates with metastatic prostate cancer; PPM1A inhibits bone metastasis in mice.
Conclusions:
- PPM1A acts as a RelA phosphatase, suppressing NF-κB signaling and exhibiting tumor suppressor-like activity.
- PPM1A inhibits prostate cancer metastasis, suggesting its therapeutic potential.
- Enhancing PPM1A activity represents a promising strategy to combat NF-κB-driven cancers and bone metastases.
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