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Immunostaining for DNA Modifications: Computational Analysis of Confocal Images
Published on: September 7, 2017
Aberrant DNA methylation of miR-219 promoter in long-term night shiftworkers
Fengqin Shi1, Xinyi Chen, Alan Fu
1Department of Environmental Health Sciences, Yale School of Public Health, New Haven, CT, USA.
Abstract:
The idea that shiftwork may be carcinogenic in humans has gained widespread attention since the pioneering work linking shiftwork to breast cancer over two decades ago. However, the biomolecular consequences of long-term shiftwork exposure have not been fully explored. In this study, we performed a genome-wide CpG island methylation assay of microRNA (miRNA) promoters in long-term night shiftworkers and day workers. This analysis indicated that 50 CpG loci corresponding to 31 miRNAs were differentially methylated in night shiftworkers compared to day workers, including the circadian-relevant miR-219, the expression of which has been implicated in several cancers. A genome-wide expression microarray assay was carried out in a miR-219-overexpressed MCF-7 breast cancer cell line, which identified 319 differentially expressed transcripts. The identified transcriptional targets were analyzed for network and functional interrelatedness using the Ingenuity Pathway Analysis (IPA) software. Overexpression of miR-219 in MCF-7 breast cancer cells resulted in accentuated expression of apoptosis- and proliferation-related anti-viral immunodulators of the Jak-STAT and NF-κβ pathways. These findings suggest that long-term night shiftwork exposure may lead to the methylation-dependent downregulation of miR-219, which may in turn lead to the downregulation of immunomediated antitumor activity and increased breast cancer risk.
Insights
Night shift work may increase breast cancer risk by altering gene expression. Long-term exposure can lead to methylation of miR-219, potentially reducing anti-tumor immunity.
Area of Science:
- Epigenetics
- Cancer Biology
- Chronobiology
Background:
- Shiftwork is suspected to be carcinogenic, particularly for breast cancer.
- Biomolecular effects of long-term shiftwork remain underexplored.
Purpose of the Study:
- Investigate genome-wide methylation and expression changes in long-term night shiftworkers.
- Determine the role of microRNA (miRNA) alterations in shiftwork-related cancer risk.
Main Methods:
- Genome-wide CpG island methylation assay of miRNA promoters in shiftworkers.
- MicroRNA expression analysis in a breast cancer cell line.
- Bioinformatic analysis of differentially expressed transcripts using Ingenuity Pathway Analysis (IPA).
Main Results:
- Differential methylation of 50 CpG loci (31 miRNAs) identified in night shiftworkers vs. day workers.
- Circadian-relevant miR-219 was among the differentially methylated miRNAs.
- Overexpression of miR-219 in breast cancer cells modulated apoptosis, proliferation, and immune pathways (Jak-STAT, NF-κβ).
Conclusions:
- Long-term night shiftwork may cause methylation-dependent downregulation of miR-219.
- This downregulation could impair immunomediated anti-tumor activity.
- Findings suggest a potential mechanism linking shiftwork to increased breast cancer risk.
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