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Updated: May 10, 2026

Formation of Ordered Biomolecular Structures by the Self-assembly of Short Peptides
Published on: November 21, 2013
The effect of secondary structures on the NLO properties of single chain oligopeptides: a comparison between β-strand
1Department of Chemistry, University of Catania, Catania, Italy. agalparone@unict.it
Abstract:
The evolution of the electronic first-order longitudinal hyperpolarizability (βzzz) and the hyperpolarizability aligned along the direction of the dipole moment (βμ) of the α-helix and β-strand single chain H2N-(CH2-CO-NH)n-CH2-COOH (n = 1-9) oligoglycines, were investigated. For this purpose we have used Hartree-Fock, second-order Møller-Plesset perturbation theory and Coulomb-attenuating Density Functional Theory computations. For the longest chain, βμ(β-strand) is one order of magnitude greater than βμ(α-helix), due to the cooperative effect of the α-helices being unfavourable for the NLO properties. The βzzz and βμ values per unit cell of the β-strand conformation were determined, extrapolating the properties in the limit of the polymer. The calculated βzzz values were elucidated using the two-state model involving the characteristic π-π* NV1 electronic transition of peptides. Single chain β-strand polyglycines can be discriminated from the α-helices using second-order NLO effects.
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