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Updated: May 9, 2026

In Vivo Functional Study of Disease-associated Rare Human Variants Using Drosophila
Published on: August 20, 2019
A novel AXIN2 germline variant associated with attenuated FAP without signs of oligondontia or ectodermal dysplasia
B Rivera1, J Perea2, E Sánchez3
1Familial Cancer Clinical Unit, Spanish National Cancer Research Centre (CNIO), Madrid, Spain.
Abstract:
Truncating mutations in the AXIN2 gene, a key regulator of β-catenin degradation in the Wnt pathway, have been reported in three families with gastrointestinal adenomatous polyposis and features of ectodermal dysplasia. However, the role of AXIN2 in familial adenomatous polyposis (FAP) syndrome is not completely understood. We performed an in-depth study of APC and MUTYH, and ruled out their implication in 23 FAP families. We then investigated the role of other genes involved in the Wnt pathway, including AXIN2, and identified a novel missense variant in AXIN2 in one family with attenuated FAP. Carriers of the variant exhibited a variable number of polyps but none showed any sign of ectodermal dysplasia. We have demonstrated the pathogenicity of this novel variant by establishing its low frequency in controls as well as by LOH analysis, a segregation study, and immunofluorescent staining of AXIN2 and β-catenin proteins. This report expands the phenotype known to be related to AXIN2 alterations and raises the question of whether to screen AXIN2 in FAP cases negative for alterations in APC and MUTYH.
Insights
Genetic analysis revealed a novel AXIN2 gene variant linked to attenuated familial adenomatous polyposis (FAP). This finding expands the known AXIN2-related phenotype beyond ectodermal dysplasia in FAP patients.
Area of Science:
- Genetics
- Molecular Biology
- Oncology
Background:
- Familial adenomatous polyposis (FAP) is a hereditary colorectal cancer syndrome.
- AXIN2 gene mutations have been associated with FAP and ectodermal dysplasia.
- The precise role of AXIN2 in FAP pathogenesis requires further elucidation.
Purpose of the Study:
- To investigate the genetic basis of FAP in families negative for APC and MUTYH mutations.
- To identify novel genetic factors contributing to FAP development.
- To characterize the clinical phenotype associated with AXIN2 alterations.
Main Methods:
- Exclusion of APC and MUTYH mutations in 23 FAP families.
- Whole-exome sequencing and targeted gene analysis of Wnt pathway genes.
- Functional validation of a novel AXIN2 variant through LOH analysis, segregation studies, and protein expression analysis.
Main Results:
- A novel missense variant in the AXIN2 gene was identified in one family with attenuated FAP.
- AXIN2 variant carriers presented with variable polyp burden but no ectodermal dysplasia.
- Functional studies confirmed the pathogenicity of the novel AXIN2 variant.
Conclusions:
- This study expands the phenotypic spectrum of AXIN2 alterations in FAP.
- AXIN2 should be considered for genetic screening in FAP cases negative for APC and MUTYH mutations.
- Further research is warranted to understand the genotype-phenotype correlation of AXIN2 variants in FAP.
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