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Updated: May 9, 2026

Detection of Targetable Alterations in Non-small Cell Lung Cancer using Next-generation Sequencing
Published on: October 10, 2025
The impact of genomic changes on treatment of lung cancer
Stephanie Cardarella1, Bruce E Johnson
11 Lowe Center for Thoracic Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts; and.
Abstract:
The remarkable success of epidermal growth factor receptor (EGFR) and anaplastic lymphoma kinase (ALK) tyrosine kinase inhibitors in patients with EGFR mutations and ALK rearrangements, respectively, introduced the era of targeted therapy in advanced non-small cell lung cancer (NSCLC), shifting treatment from platinum-based combination chemotherapy to molecularly tailored therapy. Recent genomic studies in lung adenocarcinoma identified other potential therapeutic targets, including ROS1 rearrangements, RET fusions, MET amplification, and activating mutations in BRAF, HER2, and KRAS in frequencies exceeding 1%. Lung cancers that harbor these genomic changes can potentially be targeted with agents approved for other indications or under clinical development. The need to generate increasing amounts of genomic information should prompt health-care providers to be mindful of the amounts of tissue needed for these assays when planning diagnostic procedures. In this review, we summarize oncogenic drivers in NSCLC that can be currently detected, highlight their potential therapeutic implications, and discuss practical considerations for successful application of tumor genotyping in clinical decision making.
Insights
Targeted therapies offer new hope for advanced non-small cell lung cancer (NSCLC) by targeting specific genetic mutations like EGFR and ALK. This review covers key oncogenic drivers and their therapeutic implications for personalized NSCLC treatment.
Area of Science:
- Oncology
- Genomics
- Pharmacology
Background:
- Targeted therapies, including tyrosine kinase inhibitors (TKIs), have revolutionized advanced non-small cell lung cancer (NSCLC) treatment.
- The success of EGFR and ALK inhibitors shifted treatment paradigms from chemotherapy to molecularly tailored approaches.
- Genomic studies have identified additional actionable targets in lung adenocarcinoma.
Purpose of the Study:
- To review current oncogenic drivers in NSCLC that can be detected through genotyping.
- To highlight the therapeutic implications of these identified genomic alterations.
- To discuss practical considerations for implementing tumor genotyping in clinical decision-making for NSCLC.
Main Methods:
- Review of recent genomic studies in lung adenocarcinoma.
- Identification of potential therapeutic targets beyond EGFR and ALK.
- Discussion of clinical implications and practical aspects of tumor genotyping.
Main Results:
- EGFR mutations and ALK rearrangements are key targets for NSCLC therapy.
- Other potential targets include ROS1 rearrangements, RET fusions, MET amplification, and mutations in BRAF, HER2, and KRAS.
- These genomic alterations occur in over 1% of lung adenocarcinomas and may be targeted with existing or developing agents.
Conclusions:
- Molecularly tailored therapy is the standard of care for advanced NSCLC with identified oncogenic drivers.
- Tumor genotyping is crucial for identifying patients who can benefit from targeted therapies.
- Healthcare providers must consider tissue requirements for comprehensive genomic profiling in NSCLC diagnosis.
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