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Curing the plasmid pMC1 from the poly (γ-glutamic acid) producing Bacillus amyloliquefaciens LL3 strain using plasmid
Jun Feng1, Yanyan Gu, Jingqiang Wang
1Key Laboratory of Molecular Microbiology and Technology for Ministry of Education, Nankai University, Tianjin 300071, China.
Abstract:
Bacillus amyloliquefaciens LL3 is a glutamate-independent poly-γ-glutamic acid (γ-PGA) producing strain which consists of a circular chromosome (3,995,227 bp) and an endogenous plasmid pMC1 (6,758 bp). The study of the function of native plasmid and the genome-size reduction of the B. amyloliquefaciens LL3 strain requires elimination of the endogenous plasmid. Traditional plasmid-curing procedures using sodium dodecyl sulfate (SDS) or acridine orange combined with heat treatment have been shown to be ineffective in this strain. Plasmid incompatibility is an effective method for curing which has been studied before. In our research, the hypothetical Rep protein gene and the origin of replication of the endogenous plasmid were cloned into the temperature-sensitive vector yielding the incompatible plasmid pKSV7-rep-ori. This plasmid was transformed into LL3 by electroporation. The analysis of the strain bearing incompatible plasmids after incubation at 30 °C for 30 generations showed the production of plasmid cured strains. High frequency of elimination was achieved with more than 93 % of detected strains showing to be plasmid-cured. This is the first report describing plasmid cured in a γ-PGA producing strain using this method. The plasmid-cured strains showed an increase of γ-PGA production by 6 % and led to a yield of 4.159 g/l, compared to 3.918 g/l in control and cell growth increased during the early stages of the exponential phase. Gel permeation chromatography (GPC) characterization revealed that the γ-PGA produced by plasmid-cured strains and the wild strains were identical in terms of molecular weight. What is more, the further study of plasmid function showed that curing of the endogenous plasmid did not affect its sporulation efficiency.
Insights
Bacillus amyloliquefaciens LL3 plasmid curing was achieved using a novel incompatible plasmid method, increasing poly-γ-glutamic acid (γ-PGA) production by 6%. This technique successfully eliminated the endogenous plasmid without affecting sporulation or γ-PGA molecular weight.
Area of Science:
- Microbiology
- Molecular Biology
- Biotechnology
Background:
- Bacillus amyloliquefaciens LL3 produces poly-γ-glutamic acid (γ-PGA) and possesses a chromosome and an endogenous plasmid (pMC1).
- Eliminating the endogenous plasmid is crucial for studying its function and for genome reduction.
- Conventional plasmid curing methods (SDS, acridine orange) were ineffective for this strain.
Purpose of the Study:
- To develop an effective method for eliminating the endogenous plasmid pMC1 from Bacillus amyloliquefaciens LL3.
- To investigate the impact of plasmid curing on γ-PGA production and cell growth.
- To analyze the effect of plasmid curing on γ-PGA molecular weight and sporulation efficiency.
Main Methods:
- Constructed an incompatible plasmid (pKSV7-rep-ori) by cloning the Rep protein gene and origin of replication from pMC1 into a temperature-sensitive vector.
- Transformed Bacillus amyloliquefaciens LL3 with pKSV7-rep-ori via electroporation.
- Incubated the transformed strain at 30°C for 30 generations to induce plasmid elimination, followed by analysis of plasmid-cured strains.
Main Results:
- Achieved high-frequency plasmid elimination (>93%) using the incompatible plasmid method.
- Plasmid-cured strains exhibited a 6% increase in γ-PGA production (4.159 g/l vs. 3.918 g/l).
- Enhanced early-stage cell growth and confirmed identical γ-PGA molecular weight between cured and wild strains via GPC.
Conclusions:
- Developed the first successful plasmid curing method for a γ-PGA producing Bacillus strain using plasmid incompatibility.
- Plasmid curing enhances γ-PGA yield and early cell growth without altering γ-PGA molecular weight or sporulation efficiency.
- This method provides a valuable tool for functional studies of native plasmids and strain improvement in Bacillus species.

