Related Experiment Video
Updated: May 9, 2026

09:34
Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Noonan syndrome: comparing mutation-positive with mutation-negative dutch patients
E A Croonen1, W Nillesen, C Schrander
1Department of Pediatrics, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands.
Molecular Syndromology
|July 26, 2013
Summary
Noonan syndrome (NS) genetic analysis identified mutations in RAS-MAPK pathway genes in 42% of patients lacking PTPN11 mutations. This highlights the genetic heterogeneity of NS and suggests novel gene involvement.
Area of Science:
- Genetics
- Molecular Biology
- Clinical Medicine
Background:
- Noonan syndrome (NS) is an autosomal dominant disorder with characteristic facial dysmorphisms, short stature, and congenital heart defects.
- NS is genetically heterogeneous, overlapping with other RASopathies caused by mutations affecting the RAS-MAPK pathway.
- Commonly implicated genes include PTPN11, KRAS, SOS1, RAF1, CBL, SHOC2, NRAS, BRAF, MAP2K1, MAP2K2, HRAS, NF1, and SPRED1.
Purpose of the Study:
- To perform a genotype-phenotype analysis in 33 patients clinically diagnosed with Noonan syndrome but without PTPN11 mutations.
- To investigate mutations in genes associated with RASopathies (excluding NF1 and SPRED1) in this patient cohort.
- To correlate identified mutations with clinical phenotypes and assess the diagnostic significance of core NS features.
Main Methods:
- Genetic analysis was conducted on 33 patients with a clinical diagnosis of Noonan syndrome.
- Mutation screening focused on genes within the RAS-MAPK pathway, excluding NF1 and SPRED1.
- Phenotypic data was collected and analyzed in conjunction with genetic findings.
Main Results:
- Mutations were identified in 14 (42%) of the NS patients studied.
- Specific mutations found include SOS1 (7 patients), RAF1 (3 patients), and KRAS, MAP2K2, BRAF, and SHOC2 (1 patient each).
- Patients with BRAF or MAP2K2 mutations were diagnosed with cardio-facio-cutaneous syndrome; the SHOC2 mutation case presented with Noonan-like syndrome with loose anagen hair.
Conclusions:
- The study confirms the genetic heterogeneity of Noonan syndrome beyond PTPN11 mutations, with other RAS-MAPK pathway genes frequently implicated.
- The reduced prevalence of typical NS features (face, stature, heart defect) in mutation-negative patients underscores the importance of these specific symptoms.
- The findings suggest that novel genes likely contribute to Noonan syndrome, as all mutation-negative cases met diagnostic criteria.
Related Concept Videos
Mismatch Repair
Organisms are capable of detecting and fixing nucleotide mismatches that occur during DNA replication. This sophisticated process requires identifying the new strand and replacing the erroneous bases with correct nucleotides. Mismatch repair is coordinated by many proteins in both prokaryotes and eukaryotes.
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
The Mutator Protein Family Plays a Key Role in DNA Mismatch Repair
The human genome has more than 3 billion base pairs of DNA per cell. Prior to cell division, that vast amount of genetic...
Incomplete Dominance
Gregor Mendel's work (1822 - 1884) was primarily focused on pea plants. Through his initial experiments, he determined that every gene in a diploid cell has two variants called alleles inherited from each parent. He suggested that amongst these two alleles, one allele is dominant in character and the other recessive. The combination of alleles determines the phenotype of a gene in an organism.
Pleiotropy
Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...

