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Updated: May 9, 2026

Measurement of Factor V Activity in Human Plasma Using a Microplate Coagulation Assay
Published on: September 9, 2012
Plasma protein S residues 37-50 mediate its binding to factor Va and inhibition of blood coagulation
Mary J Heeb1, Rolf M Mesters, José A Fernández
1Department of Molecular and Experimental Medicine, Scripps Research Institute, La Jolla, CA 92037, USA. heeb@scripps.edu
Insights
Protein S (PS), an anticoagulant protein, directly inhibits thrombin generation by binding coagulation factors. Researchers identified specific PS residues (37-50) crucial for binding Factor Va, mediating its anticoagulant activity.
Area of Science:
- Biochemistry
- Hematology
- Molecular Biology
Background:
- Protein S (PS) is a vital anticoagulant plasma protein.
- PS deficiency increases the risk of venous thrombosis.
- PS inhibits thrombin generation by binding coagulation factors Va and Xa.
Purpose of the Study:
- To pinpoint the specific sequences in Protein S responsible for inhibiting Factor Va activity.
- To understand the molecular mechanisms of PS-mediated anticoagulation.
Main Methods:
- Utilized monoclonal antibodies and synthetic peptides based on PS sequences.
- Performed plasma coagulation assays, purified component prothrombinase assays, binding assays, and immunoblots.
- Employed epitope mapping to identify PS regions interacting with Factor Va.
Main Results:
- Monoclonal antibody S4 demonstrated that PS N-terminal residues 37-67 are involved in inhibiting Factor Va.
- A synthetic peptide of PS residues 37-50 directly inhibited Factor Va-dependent prothrombinase activity.
- This peptide specifically bound Factor Va and blocked PS binding to Factor Va.
Conclusions:
- Protein S residues 37-50 constitute a critical binding site for Factor Va.
- This interaction mediates, at least partially, the direct anticoagulant activity of Protein S against Factor Va.
- Findings elucidate the molecular basis of Protein S's role in regulating blood coagulation.
Abstract:
Protein S (PS) is an anticoagulant plasma protein whose deficiency is associated with increased risk of venous thrombosis. PS directly inhibits thrombin generation by the blood coagulation pathways by several mechanisms, including by binding coagulation factors (F) Va and Xa. To identify PS sequences that mediate inhibition of FVa activity, antibodies and synthetic peptides based on PS sequence were prepared and employed in plasma coagulation assays, purified component prothrombinase assays, binding assays, and immunoblots. In the absence of activated protein C, monoclonal antibody (Mab) S4 shortened FXa-induced clotting in normal plasma but not in PS-depleted plasma. Mab S4 also blocked PS inhibition of FVa-dependent prothrombinase activity in purified component assays in the absence or presence of phospholipids and inhibited binding of PS to immobilised FVa. Epitope mapping identified N-terminal region residues 37-67 of PS as this antibody's epitope. A peptide representing PS residues 37-50 inhibited FVa-dependent prothrombinase activity in a non-competitive manner, with 50% inhibition observed at 11 µM peptide, whereas a peptide with a D-amino acid sequence of 37-50 was ineffective. FVa, but not FXa, bound specifically to the immobilised peptide representing residues 37-50, and the peptide inhibited binding of FVa to immobilised PS. These data implicate PS residues 37-50 as a binding site for FVa that mediates, at least in part, the direct inhibition of FVa-dependent procoagulant activity by PS.
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