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Updated: May 9, 2026

Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
A structural insight into hydroxamic acid based histone deacetylase inhibitors for the presence of anticancer
H Rajak, A Singh, K Raghuwanshi
1SLT Institute of Pharmaceutical Sciences, Guru Ghasidas University, Bilaspur-495 009 (CG) India. harishdops@yahoo.co.in.
Abstract:
Histone deacetylase inhibitors (HDACi) have been actively explored as anti-cancer agents due to their ability to prevent deacetylation of histones, resulting in uncoiling of chromatin and stimulation of a range of genes associated in the regulation of cell survival, proliferation, differentiation and apoptosis. During the past several years, many HDACi have entered pre-clinical or clinical research as anti-cancer agents with satisfying results. Out of these, more than 8 novel hydroxamic acid based HDACi i.e., belinostat, abexinostat, SB939, resminostat, givinostat, quisinostat, pentobinostat, CUDC-101 are in clinical trials and one of the drug vorinostat (SAHA) has been approved by US FDA for cutaneous T-cell lymphoma (CTCL). It is clear from the plethora of new molecules and the encouraging results from clinical trials that this class of HDAC inhibitors hold a great deal of promise for the treatment of a variety of cancers. In this review, we classified the hydroxamic acid based HDACi on the basis of their structural features into saturated, unsaturated, branched, un-branched and 5, 6-membered cyclic ring linker present between zinc binding group and connecting unit. The present article enlists reports on hydroxamic acid based HDACi designed and developed using concepts of medicinal chemistry, demonstrating that hydroxamate derivatives represent a versatile class of compounds leading to novel imaging and therapeutic agents. This article will also provide a complete insight into various structural modifications required for optimum anticancer activity.
Insights
Hydroxamic acid-based histone deacetylase inhibitors (HDACi) show promise as anti-cancer drugs. Medicinal chemistry efforts are optimizing these HDACi for improved therapeutic and imaging applications in cancer treatment.
Area of Science:
- Medicinal Chemistry
- Cancer Therapeutics
- Molecular Biology
Background:
- Histone deacetylase inhibitors (HDACi) are investigated as anti-cancer agents.
- HDACi function by preventing histone deacetylation, altering gene expression related to cell cycle control.
- Several hydroxamic acid-based HDACi are in clinical trials, with one approved for cutaneous T-cell lymphoma.
Purpose of the Study:
- To review and classify novel hydroxamic acid-based HDACi.
- To highlight the role of medicinal chemistry in designing these compounds.
- To provide insights into structural modifications for enhanced anti-cancer activity.
Main Methods:
- Classification of hydroxamic acid-based HDACi based on structural features (saturation, branching, cyclic linkers).
- Review of medicinal chemistry approaches in the design and development of these inhibitors.
- Analysis of structure-activity relationships for anti-cancer potential.
Main Results:
- Identification of over 8 novel hydroxamic acid-based HDACi in clinical trials.
- Demonstration of hydroxamate derivatives as versatile scaffolds for therapeutic and imaging agents.
- Elucidation of structural modifications crucial for optimizing anti-cancer efficacy.
Conclusions:
- Hydroxamic acid-based HDACi represent a promising class of anti-cancer therapeutics.
- Medicinal chemistry is key to developing novel HDACi with improved anti-cancer properties.
- Further structural optimization can lead to advanced imaging and therapeutic agents for various cancers.
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