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Published on: December 23, 2022
Escherichia coli sequence type 131 (ST131) subclone H30 as an emergent multidrug-resistant pathogen among US veterans
Aylin Colpan1, Brian Johnston, Stephen Porter
1University of Minnesota, Minneapolis.
Background:
Escherichia coli sequence type 131 (ST131), typically fluoroquinolone-resistant (FQ-R) and/or extended-spectrum β-lactamase (ESBL)-producing, has emerged globally. We assessed its prevalence and characteristics among US veterans.
Methods:
In 2011, 595 de-identified E. coli clinical isolates were collected systematically within 3 resistance groups (FQ-susceptible [FQ-S], FQ-R, and ESBL-producing) from 24 nationally distributed Veterans Affairs Medical Centers (VAMCs). ST131 and its H30 subclone were detected by polymerase chain reaction and compared with other E. coli for molecular traits, source, and resistance profiles.
Results:
ST131 accounted for 78% (184/236) of FQ-R and 64.2% (79/123) of ESBL-producing isolates, but only 7.2% (17/236) of FQ-S isolates (P < .001). The H30 subclone accounted for ≥95% of FQ-R and ESBL-producing, but only 12.5% of FQ-S, ST131 isolates (P < .001). By back-calculation, 28% of VAMC E. coli isolates nationally represented ST131. Overall, ST131 varied minimally in prevalence by specimen type, inpatient/outpatient source, or locale; was the most prevalent ST, followed distantly by ST95 and ST12 (13% each); and accounted for ≥40% (β-lactams), >50% (trimethoprim-sulfamethoxazole , multidrug), or >70% (ciprofloxacin, gentamicin) of total antimicrobial resistance. FQ-R and ESBL-producing ST131 isolates had higher virulence scores than corresponding non-ST131 isolates. ST131 pulsotypes overlapped extensively among VAMCs.
Conclusions:
Among US veterans, ST131, primarily its H30 subclone, accounts for most antimicrobial-resistant E. coli and is the dominant E. coli strain overall. Possible contributors include multidrug resistance, extensive virulence gene content, and ongoing transmission. Focused attention to ST131, especially its H30 subclone, could reduce infection-related morbidity, mortality, and costs among veterans.
Insights
Escherichia coli ST131 is the dominant strain among US veterans, driving most antimicrobial resistance. Focused attention on ST131, particularly the H30 subclone, can reduce infections and healthcare costs.
Area of Science:
- Microbiology
- Infectious Diseases
- Public Health
Background:
- Escherichia coli sequence type 131 (ST131) is a globally emerging pathogen.
- ST131 is frequently resistant to fluoroquinolones (FQ-R) and/or produces extended-spectrum β-lactamases (ESBL).
- The prevalence and characteristics of ST131 among US veterans were unknown.
Purpose of the Study:
- To assess the prevalence and characteristics of Escherichia coli ST131 among US veterans.
- To determine the proportion of antimicrobial resistance attributable to ST131.
- To compare the virulence of ST131 isolates with other E. coli strains.
Main Methods:
- Systematic collection of 595 E. coli clinical isolates from 24 Veterans Affairs Medical Centers in 2011.
- Categorization of isolates into fluoroquinolone-susceptible (FQ-S), FQ-resistant (FQ-R), and ESBL-producing groups.
- Detection of ST131 and its H30 subclone using polymerase chain reaction; comparison of molecular traits, source, and resistance profiles.
Main Results:
- ST131 accounted for 78% of FQ-R and 64.2% of ESBL-producing E. coli isolates.
- The H30 subclone comprised over 95% of FQ-R and ESBL-producing ST131 isolates.
- ST131 was the most prevalent E. coli strain overall, contributing significantly to antimicrobial resistance, particularly to ciprofloxacin and gentamicin.
Conclusions:
- Escherichia coli ST131, predominantly the H30 subclone, is the dominant E. coli strain among US veterans.
- ST131 is associated with multidrug resistance, high virulence gene content, and ongoing transmission.
- Targeting ST131 could decrease infection-related morbidity, mortality, and costs in the veteran population.
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