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Related Concept Videos

Evolutionary Relationships through Genome Comparisons02:54

Evolutionary Relationships through Genome Comparisons

Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
Modern Molecular Taxonomy01:29

Modern Molecular Taxonomy

Advancements in molecular biology have revolutionized the identification and characterization of bacteria, with multiple methods leveraging DNA sequencing for enhanced precision. As sequencing technologies improve and costs decline, these approaches are increasingly used in clinical, environmental, and evolutionary studies.Multilocus Sequence Typing (MLST) examines several housekeeping genes, essential chromosomal genes encoding cellular functions, to distinguish strains. Approximately...
Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
Gene Evolution - Fast or Slow?02:05

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The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
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Evolution of Microbial Genome01:08

Evolution of Microbial Genome

Microbial genome evolution is a highly dynamic process shaped by continual gene gain and loss across species and strains. This genomic flexibility allows microorganisms to adapt rapidly to environmental pressures and interactions with other organisms. Central to understanding this diversity is the distinction between the core and pan genomes.The core genome comprises the genes shared by all sampled strains of a species, representing essential functions needed for fundamental cellular processes.
Applications of Molecular Taxonomy01:20

Applications of Molecular Taxonomy

Molecular taxonomy has revolutionized the understanding and classification of bacteria, providing precise insights into their diversity, evolutionary relationships, and ecological roles. By utilizing molecular techniques such as DNA sequencing and fingerprinting, researchers have made significant strides in various fields related to bacterial studies.Resolving Taxonomic AmbiguitiesMolecular taxonomy has been instrumental in distinguishing closely related bacterial species initially thought to...

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Related Experiment Video

Updated: May 9, 2026

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq
07:09

A Bioinformatics Pipeline for Investigating Molecular Evolution and Gene Expression using RNA-seq

Published on: May 28, 2021

Workflow management systems for gene sequence analysis and evolutionary studies - A Review.

Anu Sharma1, Anil Rai, Sb Lal

  • 1Centre for Agricultural Bioinformatics, Indian Agricultural Statistics Research Institute, Library Avenue, Pusa, New Delhi - 110012.

Bioinformation
|August 10, 2013
PubMed
Summary

The post-genomic era presents challenges in bioinformatics due to numerous databases and tools. This article reviews workflow management systems for gene sequence analysis and phylogeny, aiding researchers in computational biology.

Keywords:
Analysisbioinformaticsdatabasesintegrationphylogenyworkflows

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Last Updated: May 9, 2026

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Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine
10:40

Comprehensive Workflow for the Genome-wide Identification and Expression Meta-analysis of the ATL E3 Ubiquitin Ligase Gene Family in Grapevine

Published on: December 22, 2017

Area of Science:

  • Bioinformatics
  • Computational Biology
  • Genomics

Background:

  • The post-genomic era has led to a proliferation of biological databases and analytical tools.
  • Managing and analyzing vast amounts of data from large sequencing projects is complex.
  • Heterogeneous data sources and tools hinder efficient information access and analysis for researchers.

Purpose of the Study:

  • To address the challenge of integrating diverse bioinformatics databases and tools.
  • To describe bioinformatics analysis workflow management systems specifically for gene sequence analysis and phylogeny.
  • To provide a resource for researchers in computational biology and bioinformatics.

Main Methods:

  • Review and description of existing bioinformatics analysis workflow management systems.
  • Focus on systems relevant to gene sequence analysis and phylogenetic analysis.
  • Discussion of integration challenges for databases, tools, and algorithms.

Main Results:

  • Identification of various workflow management systems in bioinformatics.
  • Highlighting the importance of integration for efficient data analysis.
  • Demonstrating the application of these systems in gene sequence and phylogenetic analysis.

Conclusions:

  • Integrated bioinformatics platforms are crucial for overcoming data access and analysis challenges.
  • Workflow management systems offer solutions for streamlining gene sequence and phylogenetic analyses.
  • This review serves as a valuable guide for biotechnologists, molecular biologists, computer scientists, and statisticians.