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Updated: May 8, 2026

Genotyping Single Nucleotide Polymorphisms in the Mitochondrial Genome by Pyrosequencing
Published on: February 10, 2023
The polymorphic AluYb8 insertion in the MUTYH gene is associated with reduced type 1 protein expression and reduced
Wenwen Guo1, Bixia Zheng, Zhenming Cai
1Department of Medical Genetics, Nanjing University School of Medicine, Nanjing, China.
Abstract:
The human mutY homolog (MUTYH) participates in base excision repair (BER), which is critical for repairing oxidized DNA bases and maintaining DNA replication fidelity. The polymorphic AluYb8 insertion in the 15(th) intron of the MUTYH gene (AluYb8MUTYH) has been shown to associate with an aggregated 8-hydroxy-2'-deoxyguanosine (8-OH-dG) lesion in genomic DNA and to serve as a risk factor for age-related diseases. In this work, we demonstrate that this variant is associated with a significant reduction of the type 1 MUTYH protein that localizes to mitochondria. Notably, this variant affects mitochondrial DNA (mtDNA) maintenance and functional mitochondrial mass in individuals homozygous for the AluYb8MUTYH variant. These findings provide evidence for an association between the AluYb8MUTYH variant and decreased mitochondrial homeostasis and, consequently, contribute to elucidating the roles of the AluYb8MUTYH variant in impairing the mitochondrial base excision repair (mtBER) system and increasing the risk of acquiring an age-related disease.
Insights
The AluYb8MUTYH variant reduces mitochondrial MUTYH protein, impairing mitochondrial DNA repair and function. This finding links the variant to decreased mitochondrial homeostasis and increased age-related disease risk.
Area of Science:
- Genetics
- Molecular Biology
- Mitochondrial Biology
Background:
- The human MUTYH gene is crucial for base excision repair (BER), maintaining genomic stability.
- Oxidized DNA bases, like 8-hydroxy-2'-deoxyguanosine (8-OH-dG), pose risks to DNA integrity.
- The AluYb8 insertion in the MUTYH gene (AluYb8MUTYH) is a known risk factor for age-related diseases.
Purpose of the Study:
- To investigate the impact of the AluYb8MUTYH variant on MUTYH protein localization and mitochondrial function.
- To explore the association between the AluYb8MUTYH variant and mitochondrial DNA (mtDNA) maintenance.
- To elucidate the role of this variant in age-related disease pathogenesis.
Main Methods:
- Analysis of MUTYH protein localization in mitochondria.
- Assessment of mtDNA maintenance in individuals with the AluYb8MUTYH variant.
- Evaluation of functional mitochondrial mass.
Main Results:
- The AluYb8MUTYH variant significantly reduces type 1 MUTYH protein in mitochondria.
- This variant impairs mtDNA maintenance and reduces functional mitochondrial mass in homozygous individuals.
- A decrease in mitochondrial homeostasis was observed in individuals with the AluYb8MUTYH variant.
Conclusions:
- The AluYb8MUTYH variant negatively impacts mitochondrial homeostasis by affecting the mitochondrial base excision repair (mtBER) system.
- This impairment contributes to an increased risk of developing age-related diseases.
- Understanding the role of AluYb8MUTYH in mtBER is vital for disease prevention strategies.
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