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Abundant sequence divergence in the native Japanese cattle Mishima-Ushi (Bos taurus) detected using whole-genome

Kaoru Tsuda1, Ryouka Kawahara-Miki, Satoshi Sano

  • 1Genome Research Center, NODAI Research Institute, Tokyo University of Agriculture, 1-1-1 Sakuragaoka, Setagaya-ku, Tokyo 156-8502, Japan.

Genomics
|August 14, 2013
PubMed

Keywords:
BACsBos taurusCASTCFTREconomic traitGAAGOMEGAMishima-UshiMolecular Evolutionary Genetics AnalysisNCAPGNJNext-generation sequencingNon-synonymous SNPsPCRQTLSNPsUTRsWhole-genome sequence analysisbacterial artificial chromosomescalpastatincystic fibrosis transmembrane conductance regulatorgene ontologyglucosidase, and alpha acidindelsinsertions and deletionsmitochondrial DNAmtDNAneighbor-joiningnon-SMC condensing I complex, subunit Gnon-synonymous SNPsnsSNPspolymerase chain reactionquantitative trait locussingle-nucleotide polymorphismsuntranslated regions

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