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Related Concept Videos

Structure-Activity Relationships and Drug Design01:28

Structure-Activity Relationships and Drug Design

Drug design is a dynamic field that involves discovering and developing new medications based on specific biological targets. This process heavily relies on structure-activity relationships (SAR) and quantitative structure-activity relationships (QSAR) to guide the design and optimization of efficient drugs.
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence its...
Drug Discovery: Overview01:26

Drug Discovery: Overview

Drug discovery is a multifaceted process involving extensive screening, testing, and optimization of lead compounds to identify potential new drugs for therapeutic use. It combines several approaches, including screening large numbers of natural products, chemical modification of known active molecules, identification of new drug targets, and rational design based on biological mechanisms and drug-receptor structure. These approaches are carried out in both academic research laboratories and...
Protein Organization01:24

Protein Organization

Proteins are polymers of amino acid residues. They are versatile and responsible for different cellular functions, including DNA replication, molecular transport, catalysis, and structural support. Proteins have a hierarchical structure comprising at least three levels of organization: primary, secondary, and tertiary structure. Some large proteins have a quaternary structure where individual protein subunits are linked together.
The primary structure of a protein is its amino acid sequence.
Protein-protein Interfaces02:04

Protein-protein Interfaces

Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...

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Related Experiment Video

Updated: May 8, 2026

Incorporating Target Protein Structure Flexibility and Dynamics in Computational Drug Discovery Using Ensemble-Based Docking Analysis
08:49

Incorporating Target Protein Structure Flexibility and Dynamics in Computational Drug Discovery Using Ensemble-Based Docking Analysis

Published on: June 20, 2025

Impact of computational structure-based methods on drug discovery.

Charles H Reynolds1

  • 1Gfree Bio, LLC, 3805 Old Easton Road, Doylestown, Pennsylvania 18902. creynolds@gfreebio.com.

Current Pharmaceutical Design
|August 17, 2013
PubMed
Summary

Structure-based drug design leverages structural biology and computational power to accelerate the discovery of new medicines. This approach has significantly impacted modern drug development, leading to groundbreaking therapeutic innovations.

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Nano-Differential Scanning Fluorimetry for Screening in Fragment-based Lead Discovery

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Last Updated: May 8, 2026

Incorporating Target Protein Structure Flexibility and Dynamics in Computational Drug Discovery Using Ensemble-Based Docking Analysis
08:49

Incorporating Target Protein Structure Flexibility and Dynamics in Computational Drug Discovery Using Ensemble-Based Docking Analysis

Published on: June 20, 2025

Nano-Differential Scanning Fluorimetry for Screening in Fragment-based Lead Discovery
06:26

Nano-Differential Scanning Fluorimetry for Screening in Fragment-based Lead Discovery

Published on: May 16, 2021

Area of Science:

  • Biochemistry
  • Computational Chemistry
  • Pharmacology

Background:

  • Structure-based drug design (SBDD) is a critical tool in modern drug discovery.
  • Advances in structural biology, computational algorithms, and computing power have driven SBDD's emergence.
  • Numerous groundbreaking drugs have resulted from SBDD methodologies.

Purpose of the Study:

  • To highlight the evolution of computational structure-based drug design.
  • To demonstrate the impact of SBDD on drug discovery.

Main Methods:

  • Review of advancements in structural biology techniques.
  • Analysis of new computational algorithms for modeling protein-ligand interactions.
  • Examination of the role of increased computational power.

Main Results:

  • Exponential growth in protein crystal structure availability.
  • Development of sophisticated computational modeling approaches.
  • Significant contributions of computer modeling and simulation to drug discovery.

Conclusions:

  • Computational structure-based design is indispensable in modern drug discovery.
  • The methodology has evolved significantly over the past 30 years.
  • SBDD continues to drive the development of innovative therapeutics.