Related Experiment Video
Updated: May 8, 2026

An Optimized Protocol for Electrophoretic Mobility Shift Assay Using Infrared Fluorescent Dye-labeled Oligonucleotides
Published on: November 29, 2016
Sox transcription factors require selective interactions with Oct4 and specific transactivation functions to mediate
Irene Aksoy1, Ralf Jauch, Volker Eras
1Stem Cell and Developmental biology, Genome Institute of Singapore, Singapore, Singapore.
Sox17 and Sox7 can be engineered to reprogram cells into induced pluripotent stem cells (iPSCs). Specific mutations in their HMG domain and C-terminus are key to this cell reprogramming ability.
Area of Science:
- Stem Cell Biology
- Molecular Biology
- Genetics
Background:
- Sox2 and Oct4 are crucial for reprogramming somatic cells into induced pluripotent stem cells (iPSCs).
- Previous work showed Sox17 can become a reprogramming factor (Sox17EK) via a single amino acid mutation.
Purpose of the Study:
- To investigate if analogous mutations in other Sox proteins can confer reprogramming ability.
- To explore the role of N- and C-termini in Sox protein reprogramming efficiency.
Main Methods:
- Point mutations were introduced into 10 different Sox proteins.
- Fibroblast reprogramming assays were performed.
- ChIP-sequencing and expression data analysis were used to understand mechanisms.
Main Results:
- Sox7 and Sox17 with specific mutations (Sox7EK, Sox17EK) successfully reprogrammed human and mouse fibroblasts into iPSCs.
- Other mutated Sox proteins (Sox4, Sox5, Sox6, Sox8, Sox9, Sox11, Sox12, Sox13, Sox18) did not show reprogramming potential.
- The C-terminal transactivation domain of Sox17 and Sox7 enhanced Sox2 potency and conferred weak reprogramming to Sox4EK and Sox18EK.
- The β-catenin interaction region in Sox17's C-terminus contributed to enhanced reprogramming.
- A subset of genes specifically regulated by Sox17EK, not Sox2, was identified.
Conclusions:
- A single HMG domain mutation (E to K) is necessary but not sufficient for swapping Sox factor function.
- The C-terminus, particularly the β-catenin interaction region, plays a significant role in enhancing reprogramming efficiency.
- Sox17EK and Sox7EK represent novel reprogramming factors with potential applications in regenerative medicine.
More Related Videos
Related Concept Videos
Somatic to iPS Cell Reprogramming
Methods of Nuclear Reprogramming
Master Transcription Regulators
Master Transcription Regulators
Combinatorial Gene Control
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
Co-activators and Co-repressors

