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Updated: May 8, 2026

Genotyping of Staphylococcus aureus by Ribosomal Spacer PCR (RS-PCR)
Published on: November 4, 2016
Characterization and genomic analysis of two Staphylococcus aureus bacteriophages isolated from poultry/livestock
Hyunjin Yoon1, Jiae Yun2, Jeong-A Lim3
1Department of Food Technology and Services, College of Health Industry, Eulji university, Seongnam 461-713, Korea.
Abstract:
Staphylococcus aureus is one of the most important pathogens, causing various diseases in humans and animals. As methicillin-resistant S. aureus (MRSA) has become increasingly prevalent, controlling this pathogen with standard antibiotic treatment has become challenging. Bacteriophages (phages) have attracted interest as alternative antibacterial agents to control MRSA. In this study, we isolated six S. aureus phages from soils of poultry/livestock farms. Based on the results of host range determination with 150 S. aureus strains and restriction enzyme treatment of phage DNA, two phages, designated SP5 and SP6, were selected for further characterization and genome sequencing. Both SP5 and SP6 were classified as members of the family Siphoviridae. The genome of SP5 comprises 43 305 bp and contains 63 ORFs, while the SP6 genome comprises 42 902 bp and contains 61 ORFs. Although they have different host spectra, the phage genomes exhibit high nucleotide similarity to each other. Adsorption assay results suggested that the host range determinants of the two phages are involved in both adsorption and infection. Comparative genomic analyses of the two phages provided evidence that the lysogenic/lytic control module and tail proteins may be important for host specificity.
Insights
This study isolated two Staphylococcus aureus phages, SP5 and SP6, from farm soil. Genomic analysis revealed these phages, potential alternatives to antibiotics for controlling methicillin-resistant S. aureus (MRSA), have distinct host ranges but similar genomes.
Area of Science:
- Microbiology
- Bacteriology
- Virology
Background:
- Staphylococcus aureus is a significant pathogen causing human and animal diseases.
- The rise of methicillin-resistant S. aureus (MRSA) complicates standard antibiotic treatments.
- Bacteriophages (phages) are explored as potential alternatives for MRSA control.
Purpose of the Study:
- To isolate and characterize bacteriophages effective against Staphylococcus aureus.
- To investigate the genomic features and host specificity of selected phages.
- To explore phage-based strategies for combating MRSA infections.
Main Methods:
- Isolation of six S. aureus phages from poultry/livestock farm soil.
- Host range determination using 150 S. aureus strains.
- Phage DNA restriction enzyme treatment, genome sequencing, and comparative genomic analysis.
- Adsorption assays to investigate host range determinants.
Main Results:
- Two phages, SP5 and SP6, belonging to the Siphoviridae family, were selected for detailed study.
- SP5 and SP6 genomes consist of 43,305 bp (63 ORFs) and 42,902 bp (61 ORFs), respectively.
- Despite differing host spectra, the phages share high nucleotide similarity.
- Adsorption assays indicate host range is influenced by both phage adsorption and infection processes.
Conclusions:
- The isolated phages SP5 and SP6 show promise as agents against S. aureus.
- Genomic comparison suggests lysogenic/lytic control modules and tail proteins are key to phage host specificity.
- Phage therapy presents a viable alternative for managing MRSA infections.
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