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From a Natural Product to Its Biosynthetic Gene Cluster: A Demonstration Using Polyketomycin from Streptomyces diastatochromogenes Tü6028
Published on: January 13, 2017
Streptomycin application has no detectable effect on bacterial community structure in apple orchard soil
Ashley Shade1, Amy K Klimowicz, Russell N Spear
1Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, Connecticut, USA.
Aerial application of streptomycin for apple tree fire blight control showed minimal impact on soil bacterial communities. This antibiotic use for disease management appears to have few immediate consequences for nontarget bacteria in orchards.
Area of Science:
- Agricultural Microbiology
- Environmental Science
- Bacterial Ecology
Background:
- Streptomycin is widely used to manage fire blight disease in apple orchards.
- Concerns exist regarding the nontarget environmental effects of streptomycin application.
- Limited data is available on streptomycin's impact on soil microbial communities in agricultural settings.
Purpose of the Study:
- To investigate the effects of aerial streptomycin application on nontarget soil bacterial communities in a commercial apple orchard.
- To assess immediate impacts on bacterial community structure, diversity, and evenness.
Main Methods:
- Soil samples were collected from treated and untreated apple trees over two consecutive years.
- Bacterial DNA was profiled using 16S rRNA gene tag-pyrosequencing from cultured and uncultured sources.
- Multivariate statistical analyses were employed to compare community structures.
Main Results:
- No significant differences were observed in bacterial community structure between streptomycin-treated and untreated soil.
- Shannon diversity and Pielou's evenness tests indicated no discernible response to streptomycin application.
- Cultured and uncultured bacterial communities showed resilience to streptomycin treatment.
Conclusions:
- Aerial streptomycin application for fire blight management has minimal immediate effects on apple orchard soil bacterial communities.
- The study suggests that antibiotic use in this agroecosystem poses limited risks to nontarget soil bacteria.
- Findings contribute to understanding the environmental profile of antibiotic use in agriculture.
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