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Updated: May 8, 2026

Functional Characterization of RING-Type E3 Ubiquitin Ligases In Vitro and In Planta
Published on: December 5, 2019
RIG-I forms signaling-competent filaments in an ATP-dependent, ubiquitin-independent manner
Alys Peisley1, Bin Wu, Hui Yao
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Program in Cellular and Molecular Medicine, Children's Hospital Boston, Boston, MA 02115, USA.
Abstract:
Retinoic acid-inducible gene 1 (RIG-I) and melanoma differentiation-associated protein 5 (MDA5) are paralogous receptors for viral double-stranded RNA (dsRNA) with divergent specificity. We have previously shown that MDA5 forms filaments upon viral dsRNA recognition and that this filament formation is essential for interferon signal activation. Here, we show that while RIG-I binds to a dsRNA end as a monomer in the absence of ATP, it assembles in the presence of ATP into a filament that propagates from the dsRNA end to the interior. Furthermore, RIG-I filaments directly stimulate mitochondrial antiviral signaling (MAVS) filament formation without any cofactor, such as polyubiquitin chains, and forced juxtaposition of the isolated signaling domain of RIG-I, as it would be in the filament, is sufficient to activate interferon signaling. Our findings thus define filamentous architecture as a common yet versatile molecular platform for divergent viral RNA detection and proximity-induced signal activation by RIG-I and MDA5.
Insights
Retinoic acid-inducible gene 1 (RIG-I) forms filaments on viral RNA, activating antiviral immunity. This filamentous assembly is key for RIG-I and MDA5 to detect viral dsRNA and signal interferon production.
Area of Science:
- Immunology
- Molecular Biology
- Virology
Background:
- Retinoic acid-inducible gene 1 (RIG-I) and melanoma differentiation-associated protein 5 (MDA5) are key sensors of viral RNA.
- MDA5 filament formation upon dsRNA binding is known to be crucial for interferon signaling.
- RIG-I's mechanism of dsRNA recognition and signaling activation remained less understood.
Purpose of the Study:
- To elucidate the mechanism of RIG-I activation and filament formation upon viral dsRNA recognition.
- To compare the signaling pathways activated by RIG-I and MDA5.
- To define the role of filamentous architecture in innate antiviral immunity.
Main Methods:
- Biochemical assays to study RIG-I binding to dsRNA in the presence and absence of ATP.
- Filament formation assays for RIG-I and MAVS.
- Interferon signaling activation assays.
Main Results:
- RIG-I binds dsRNA as a monomer without ATP but forms filaments with ATP, propagating along the dsRNA.
- RIG-I filaments directly induce MAVS filament formation without cofactors.
- Proximity of RIG-I signaling domains within filaments is sufficient for interferon signaling.
Conclusions:
- Filamentous assembly is a conserved mechanism for RIG-I and MDA5 in viral RNA detection.
- RIG-I filament formation is essential for initiating interferon signaling.
- This study highlights a versatile molecular platform for innate immune activation against viruses.
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