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Updated: May 7, 2026

Genome-Wide CRISPR Screen for Unveiling Radiosensitive and Radioresistant Genes
Published on: May 23, 2025
Proteasome inhibitors block DNA repair and radiosensitize non-small cell lung cancer
Kyle R Cron1, Kaya Zhu, Deepa S Kushwaha
1Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, United States of America.
Abstract:
Despite optimal radiation therapy (RT), chemotherapy and/or surgery, a majority of patients with locally advanced non-small cell lung cancer (NSCLC) fail treatment. To identify novel gene targets for improved tumor control, we performed whole genome RNAi screens to identify knockdowns that most reproducibly increase NSCLC cytotoxicity. These screens identified several proteasome subunits among top hits, including the topmost hit PSMA1, a component of the core 20 S proteasome. Radiation and proteasome inhibition showed synergistic effects. Proteasome inhibition resulted in an 80-90% decrease in homologous recombination (HR), a 50% decrease in expression of NF-κB-inducible HR genes BRCA1 and FANCD2, and a reduction of BRCA1, FANCD2 and RAD51 ionizing radiation-induced foci. IκBα RNAi knockdown rescued NSCLC radioresistance. Irradiation of mice with NCI-H460 xenografts after inducible PSMA1 shRNA knockdown markedly increased murine survival compared to either treatment alone. Proteasome inhibition is a promising strategy for NSCLC radiosensitization via inhibition of NF-κB-mediated expression of Fanconi Anemia/HR DNA repair genes.
Insights
Targeting proteasome subunits, like PSMA1, can enhance radiation therapy for non-small cell lung cancer (NSCLC). This approach inhibits DNA repair, improving tumor control and patient survival in preclinical models.
Area of Science:
- Oncology
- Molecular Biology
- Radiotherapy
Background:
- Locally advanced non-small cell lung cancer (NSCLC) often shows resistance to standard treatments like radiation therapy (RT), chemotherapy, and surgery.
- Identifying novel therapeutic targets is crucial for improving treatment outcomes in NSCLC patients.
Purpose of the Study:
- To identify gene targets that enhance the efficacy of radiation therapy in non-small cell lung cancer (NSCLC).
- To investigate the role of proteasome subunits in NSCLC radioresistance and explore proteasome inhibition as a radiosensitization strategy.
Main Methods:
- Whole genome RNA interference (RNAi) screens were conducted to identify gene knockdowns increasing NSCLC cytotoxicity.
- The effects of proteasome inhibition on DNA repair pathways, including homologous recombination (HR), were assessed.
- Synergistic effects of radiation and proteasome inhibition were evaluated in vitro and in vivo using NSCLC cell lines and xenograft mouse models.
Main Results:
- Proteasome subunits, particularly PSMA1, were identified as top hits in RNAi screens for enhancing NSCLC cytotoxicity.
- Proteasome inhibition significantly decreased homologous recombination (HR) by 80-90% and reduced the expression of HR genes BRCA1 and FANCD2.
- Combined treatment of radiation with proteasome inhibition demonstrated synergistic effects, markedly increasing survival in a mouse model of NSCLC.
Conclusions:
- Proteasome inhibition, specifically targeting PSMA1, is a promising strategy for radiosensitizing non-small cell lung cancer (NSCLC).
- This radiosensitization occurs through the inhibition of NF-κB-mediated expression of Fanconi Anemia/HR DNA repair genes, thereby enhancing tumor control.
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