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Updated: May 7, 2026

Gastric Mucosa Quantitative Polymerase Chain Reaction Analysis for Detecting Helicobacter pylori and Antibiotic Resistance
Published on: March 7, 2025
Gastric antimicrobial peptides fail to eradicate Helicobacter pylori infection due to selective induction and
Sabine Nuding1, Michael Gersemann, Yoshio Hosaka
1Dr. Margarete Fischer-Bosch-Institute of Clinical Pharmacology and University of Tübingen, Stuttgart, Germany.
Background:
Although antimicrobial peptides protect mucus and mucosa from bacteria, Helicobacter pylori is able to colonize the gastric mucus. To clarify in which extend Helicobacter escapes the antimicrobial defense, we systematically assessed susceptibility and expression levels of different antimicrobial host factors in gastric mucosa with and without H. pylori infection.
Materials And Methods:
We investigated the expression levels of HBD1 (gene name DEFB1), HBD2 (DEFB4A), HBD3 (DEFB103A), HBD4 (DEFB104A), LL37 (CAMP) and elafin (PI3) by real time PCR in gastric biopsy samples in a total of 20 controls versus 12 patients colonized with H. pylori. Immunostaining was performed for HBD2 and HBD3. We assessed antimicrobial susceptibility by flow cytometry, growth on blood agar, radial diffusion assay and electron microscopy.
Results:
H. pylori infection was associated with increased gastric levels of the inducible defensin HBD2 and of the antiprotease elafin, whereas the expression levels of the constitutive defensin HBD1, inducible HBD3 and LL37 remained unchanged. HBD4 was not expressed in significant levels in gastric mucosa. H. pylori strains were resistant to the defensins HBD1 as well as to elafin, and strain specific minimally susceptible to HBD2, whereas HBD3 and LL37 killed all H. pylori strains effectively. We demonstrated the binding of HBD2 and LL37 on the surface of H. pylori cells. Comparing the antibacterial activity of extracts from H. pylori negative and positive biopsies, we found only a minimal killing against H. pylori that was not increased by the induction of HBD2 in H. pylori positive samples.
Conclusion:
These data support the hypothesis that gastric H. pylori evades the host defense shield to allow colonization.
Insights
Helicobacter pylori colonizes the stomach by evading antimicrobial peptides. While H. pylori resists some peptides, it is susceptible to human beta-defensin 3 (HBD3) and LL37, suggesting a complex host-pathogen interaction.
Area of Science:
- Microbiology
- Immunology
- Gastroenterology
Background:
- Antimicrobial peptides (AMPs) protect mucosal surfaces from bacterial invasion.
- Helicobacter pylori (H. pylori) successfully colonizes the gastric environment despite AMP presence.
Purpose of the Study:
- To investigate H. pylori's evasion mechanisms against gastric antimicrobial host factors.
- To assess the susceptibility of H. pylori to various AMPs and antiproteases.
Main Methods:
- Real-time PCR to quantify AMP gene expression (HBD1-4, LL37, elafin) in gastric biopsies.
- Immunostaining for HBD2 and HBD3.
- Antimicrobial susceptibility testing using flow cytometry, bacterial growth assays, and electron microscopy.
Main Results:
- H. pylori infection upregulated inducible defensin HBD2 and antiprotease elafin.
- H. pylori strains showed resistance to HBD1 and elafin, minimal susceptibility to HBD2, but were effectively killed by HBD3 and LL37.
- Despite increased HBD2, gastric extracts showed minimal H. pylori killing activity.
Conclusions:
- Gastric H. pylori employs strategies to evade the host's antimicrobial defense shield.
- The study supports the hypothesis of H. pylori actively circumventing host immunity for colonization.
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