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Updated: May 7, 2026

In-vitro Reconstitution of Bacterial Ubiquitination and VCP/p97-mediated Elimination
Published on: January 2, 2026
In vitro reconstitution of peptidoglycan assembly from the Gram-positive pathogen Streptococcus pneumoniae
André Zapun1, Jules Philippe, Katherine A Abrahams
1Université Grenoble Alpes, Institut de Biologie Structurale (IBS), Grenoble F-38027, France.
Abstract:
Understanding the molecular basis of bacterial cell wall assembly is of paramount importance in addressing the threat of increasing antibiotic resistance worldwide. Streptococcus pneumoniae presents a particularly acute problem in this respect, as it is capable of rapid evolution by homologous recombination with related species. Resistant strains selected by treatment with β-lactams express variants of the target enzymes that do not recognize the drugs but retain their activity in cell wall building, despite the antibiotics being mimics of the natural substrate. Until now, the crucial transpeptidase activity that is inhibited by β-lactams was not amenable to in vitro investigation with enzymes from Gram-positive organisms, including streptococci, staphylococci, or enterococci pathogens. We report here for the first time the in vitro assembly of peptidoglycan using recombinant penicillin-binding proteins from pneumococcus and the precursor lipid II. The two required enzymatic activities, glycosyl transferase for elongating glycan chains and transpeptidase for cross-linking stem-peptides, were observed. Most importantly, the transpeptidase activity was dependent on the chemical nature of the stem-peptide. Amidation of the second residue glutamate into iso-glutamine by the recently discovered amido-transferase MurT/GatD is required for efficient cross-linking of the peptidoglycan.
Insights
This study demonstrates in vitro bacterial cell wall assembly using Streptococcus pneumoniae enzymes. It reveals that amidation by MurT/GatD is crucial for efficient peptidoglycan cross-linking, offering insights into antibiotic resistance mechanisms.
Area of Science:
- Microbiology
- Molecular Biology
- Biochemistry
Background:
- Antibiotic resistance is a global health threat, driven by bacterial evolution.
- Streptococcus pneumoniae rapidly evolves resistance to β-lactam antibiotics.
- Target enzymes in resistant strains bypass drug inhibition while maintaining cell wall synthesis.
Purpose of the Study:
- To investigate the in vitro assembly of bacterial cell walls.
- To characterize the transpeptidase activity of penicillin-binding proteins from Streptococcus pneumoniae.
- To identify factors influencing peptidoglycan cross-linking.
Main Methods:
- Recombinant penicillin-binding proteins from Streptococcus pneumoniae were used.
- In vitro assembly of peptidoglycan was performed using Lipid II precursor.
- Enzymatic activities (glycosyl transferase and transpeptidase) were analyzed.
Main Results:
- Successful in vitro assembly of peptidoglycan was achieved.
- Both glycosyl transferase and transpeptidase activities were observed.
- Transpeptidase activity was dependent on stem-peptide amidation by MurT/GatD.
Conclusions:
- Amidation of glutamate to iso-glutamine by MurT/GatD is essential for efficient peptidoglycan cross-linking.
- This finding provides a molecular basis for understanding β-lactam resistance in Streptococcus pneumoniae.
- The study establishes a new in vitro system for studying Gram-positive bacterial cell wall synthesis.
Related Concept Videos
Peptidoglycan Synthesis
Inhibitors of Gram-positive Cell Wall Synthesis
Formation of Lipopolysaccharides
Production of Antibiotics

