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MAPK Signaling Cascades01:07

MAPK Signaling Cascades

Mitogen-activated protein kinase, or MAPK pathway, activates three sequential kinases to regulate cellular responses such as proliferation, differentiation, survival, and apoptosis. The canonical MAPK pathway starts with a mitogen or growth factor binding to an RTK. The activated RTKs stimulate Ras, which recruits Raf or MAP3 Kinase (MAPKKK), the first kinase of the MAPK signaling cascade. Raf further phosphorylates and activates MEK or MAP2 Kinases (MAPKK), which in turn phosphorylates MAP...
Assembly of Signaling Complexes01:30

Assembly of Signaling Complexes

Multiprotein signaling complexes are formed in a dynamic process involving protein-protein interactions at the cytoplasmic domain of transmembrane receptors or enzymatic and non-enzymatic proteins associated with the receptor. These complexes ensure the activation and propagation of intracellular signals that regulate cell functions.
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
PI3K/mTOR/AKT Signaling Pathway01:22

PI3K/mTOR/AKT Signaling Pathway

The mammalian target of rapamycin  (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1  (mTORC1) and mTOR complex 2  (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast,  mTORC2 consists of a rapamycin-insensitive companion...
The JAK-STAT Signaling Pathway01:20

The JAK-STAT Signaling Pathway

Several cytokine receptors have tightly bound Janus kinase or JAK proteins attached at their cytosolic tail. Small signaling molecules such as cytokines, growth hormones, or prolactins bind to the cytokine receptors and initiate their dimerization. The dimerization brings the cytosolic JAKs together that trans-phosphorylate and activates each other. The activated JAKs now phosphorylate cytosolic tails of the cytokine receptors, which serve as binding sites for adaptor proteins such as  SH2...
Amplifying Signals via Enzymatic Cascade01:22

Amplifying Signals via Enzymatic Cascade

When a ligand binds to a cell-surface receptor, the receptor's intracellular domain changes shape, which may either activate its enzyme function or allow its binding to other molecules. The initial signal is amplified by most signal transduction pathways. This means that a single ligand molecule can activate multiple molecules of a downstream target. Proteins that relay a signal are most commonly phosphorylated at one or more sites, activating or inactivating the protein. Kinases catalyze the...
cAMP-dependent Protein Kinase Pathways01:25

cAMP-dependent Protein Kinase Pathways

Cyclic Adenosine Monophosphate (cAMP) is an essential second messenger that activates protein kinase A (PKA) and regulates various biological processes. A single epinephrine molecule binds to GPCR and activates several heterotrimeric G proteins, each stimulating multiple adenylyl cyclase, amplifying the signal, and synthesizing large numbers of cAMP molecules. Small changes in cAMP concentration affect PKA activity. The binding of four cAMP molecules induces a conformational change in PKA,...

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Related Experiment Video

Updated: May 7, 2026

Assaying Protein Kinase Activity with Radiolabeled ATP
08:05

Assaying Protein Kinase Activity with Radiolabeled ATP

Published on: May 26, 2017

Imaging kinase activity at protein scaffolds.

Maya T Kunkel1, Alexandra C Newton

  • 1Department of Pharmacology, University of California at San Diego, San Diego, CA, USA.

Methods in Molecular Biology (Clifton, N.J.)
|September 21, 2013
PubMed
Summary

This study presents a method to measure kinase activity at protein scaffolds in living cells. It utilizes a genetically encoded sensor to visualize kinase signaling dynamics in real-time.

Area of Science:

  • Cellular signaling
  • Molecular biology
  • Biochemistry

Background:

  • Kinase signaling pathways are crucial for cellular functions and are tightly regulated in space and time.
  • Protein scaffolds play a key role in organizing signaling hubs and coordinating kinase activity.
  • Understanding kinase signaling dynamics is essential for deciphering cellular processes and disease mechanisms.

Purpose of the Study:

  • To describe a protocol for assaying kinase activity at protein scaffolds in live cells.
  • To demonstrate the utility of genetically encoded kinase activity reporters for interrogating signaling dynamics.
  • To provide a specific example using a Förster Resonance Energy Transfer (FRET)-based sensor for Protein Kinase D (PKD).

Main Methods:

  • Development and application of a FRET-based kinase activity sensor.

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Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
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Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein

Published on: June 30, 2019

Identification of Kinase-substrate Pairs Using High Throughput Screening
11:13

Identification of Kinase-substrate Pairs Using High Throughput Screening

Published on: August 29, 2015

Related Experiment Videos

Last Updated: May 7, 2026

Assaying Protein Kinase Activity with Radiolabeled ATP
08:05

Assaying Protein Kinase Activity with Radiolabeled ATP

Published on: May 26, 2017

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein
11:23

Characterization at the Molecular Level using Robust Biochemical Approaches of a New Kinase Protein

Published on: June 30, 2019

Identification of Kinase-substrate Pairs Using High Throughput Screening
11:13

Identification of Kinase-substrate Pairs Using High Throughput Screening

Published on: August 29, 2015

  • Live-cell imaging techniques to monitor kinase activity at specific cellular locations.
  • Utilizing genetically encoded reporters for spatiotemporal analysis of signaling events.
  • Main Results:

    • The protocol enables real-time measurement of kinase activity at protein scaffolds.
    • The FRET sensor allows visualization of the rate, amplitude, and duration of kinase signaling.
    • Demonstrated successful application of the sensor for assaying Protein Kinase D (PKD) activity.

    Conclusions:

    • Genetically encoded FRET sensors are powerful tools for studying kinase signaling dynamics in live cells.
    • This protocol facilitates the investigation of kinase activity at protein scaffolds with high spatiotemporal resolution.
    • The methodology provides insights into the regulation of signaling hubs and kinase function within the cell.