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Updated: May 7, 2026

Merkel Cell Polyomavirus Infection and Detection
Published on: February 7, 2019
The T antigen locus of Merkel cell polyomavirus downregulates human Toll-like receptor 9 expression
Naveed Shahzad1, Masahiro Shuda, Tarik Gheit
1International Agency for Research on Cancer, Lyon, France.
Abstract:
Establishment of a chronic infection is a key event in virus-mediated carcinogenesis. Several cancer-associated, double-stranded DNA (dsDNA) viruses act via their oncoproteins to downregulate Toll-like receptor 9 (TLR9), a key receptor in the host innate immune response that senses viral or bacterial dsDNA. A novel oncogenic virus, Merkel cell polyomavirus (MCPyV), has been recently identified that causes up to 80% of Merkel cell carcinomas (MCCs). However, it is not yet known whether this oncogenic virus also disrupts immune-related pathways. We find that MCPyV large T antigen (LT) expression downregulates TLR9 expression in epithelial and MCC-derived cells. Accordingly, silencing of LT expression results in upregulation of mRNA TLR9 levels. In addition, small T antigen (sT) also appears to inhibit TLR9 expression, since inhibition of its expression also resulted in an increase of TLR9 mRNA levels. LT inhibits TLR9 expression by decreasing the mRNA levels of the C/EBPβ transactivator, a positive regulator of the TLR9 promoter. Chromatin immunoprecipitation reveals that C/EBPβ binding at a C/EBPβ response element (RE) in the TLR9 promoter is strongly inhibited by expression of MCPyV early genes and that mutation of the C/EBP RE prevents MCPyV downregulation of TLR9. A survey of BK polyomavirus (BKPyV), JC polyomavirus (JCPyV), KI polyomavirus (KIPyV), MCPyV, simian virus 40 (SV40), and WU polyomavirus (WUPyV) early genes revealed that only BKPyV and MCPyV are potent inhibitors of TLR9 gene expression. MCPyV LT targeting of C/EBP transactivators is likely to play an important role in viral persistence and potentially inhibit host cell immune responses during MCPyV tumorigenesis.
Insights
Merkel cell polyomavirus (MCPyV) oncoproteins downregulate Toll-like receptor 9 (TLR9) expression, a key immune sensor. This viral immune evasion mechanism may contribute to MCPyV-driven Merkel cell carcinoma development.
Area of Science:
- Virology
- Immunology
- Oncology
Background:
- Chronic viral infections are linked to cancer development.
- Cancer-associated viruses often evade the immune system by downregulating Toll-like receptor 9 (TLR9), which detects viral DNA.
- Merkel cell polyomavirus (MCPyV) is a novel oncogenic virus causing Merkel cell carcinoma (MCC), but its immune evasion strategies are unclear.
Purpose of the Study:
- To investigate whether MCPyV disrupts immune-related pathways, specifically TLR9 expression.
- To elucidate the mechanism by which MCPyV may affect TLR9 expression.
- To compare the effects of MCPyV with other polyomaviruses on TLR9 expression.
Main Methods:
- Studied the effect of MCPyV large T antigen (LT) and small T antigen (sT) expression on TLR9 levels in epithelial and MCC cells.
- Utilized gene silencing to assess the impact of LT and sT on TLR9 mRNA.
- Investigated the role of the C/EBPβ transactivator in MCPyV-mediated TLR9 downregulation using promoter analysis and chromatin immunoprecipitation.
- Surveyed multiple polyomaviruses for their ability to inhibit TLR9 gene expression.
Main Results:
- MCPyV LT and sT expression significantly downregulate TLR9 expression in relevant cell types.
- Silencing LT or sT leads to increased TLR9 mRNA levels.
- MCPyV LT inhibits TLR9 by reducing C/EBPβ mRNA levels, a positive regulator of the TLR9 promoter.
- MCPyV early gene expression inhibits C/EBPβ binding to the TLR9 promoter, and mutation of this site prevents MCPyV-induced TLR9 downregulation.
- Only MCPyV and BK polyomavirus (BKPyV) among the tested viruses potently inhibit TLR9 expression.
Conclusions:
- MCPyV oncoproteins, particularly LT, actively downregulate TLR9 expression.
- This downregulation is mediated by inhibiting the C/EBPβ transactivator, crucial for TLR9 promoter activity.
- MCPyV's targeting of TLR9 likely contributes to viral persistence and immune evasion, facilitating tumorigenesis in MCC.
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