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Updated: May 7, 2026

Protein Misfolding Cyclic Amplification of Prions
Published on: November 7, 2012
Cofactor molecules induce structural transformation during infectious prion formation
Michael B Miller1, Daphne W Wang, Fei Wang
1Department of Biochemistry, Geisel School of Medicine at Dartmouth, Hanover, NH 03755, USA.
Abstract:
The spread of misfolded proteins may occur in many neurodegenerative diseases. Mammalian prions are currently the only misfolded proteins in which high specific biological infectivity can be produced in vitro. Using a system that generates infectious prions de novo from purified recombinant PrP and conversion cofactors palmitoyl-oleoyl-phosphatidylglycerol (POPG) and RNA, we examined by deuterium exchange mass spectrometry (DXMS) the stepwise protein conformational changes that occur during prion formation. We found that initial incubation with POPG causes major structural changes in PrP involving all three α helices and one β strand, with subsequent addition of RNA rendering the N terminus highly exposed. Final conversion into the infectious PrP(Sc) form was accompanied by globally decreased solvent exposure, with persistence of the major cofactor-induced conformational features. Thus, we report that cofactor molecules appear to induce major structural rearrangements during prion formation, initiating a dynamic sequence of conformational changes resulting in biologically active prions.
Insights
Cofactor molecules induce major structural changes during prion formation. This dynamic process, studied using deuterium exchange mass spectrometry, results in biologically active prions from recombinant PrP.
Area of Science:
- Biochemistry
- Neuroscience
- Structural Biology
Background:
- Misfolded proteins spread in neurodegenerative diseases.
- Mammalian prions are uniquely infectious in vitro.
- Prion formation involves complex protein conformational changes.
Purpose of the Study:
- To investigate stepwise protein conformational changes during prion formation.
- To understand the role of cofactors (POPG and RNA) in prion genesis.
- To elucidate the structural pathway from recombinant PrP to infectious PrP(Sc).
Main Methods:
- Generation of infectious prions de novo from purified recombinant PrP.
- Utilizing deuterium exchange mass spectrometry (DXMS) to monitor conformational changes.
- Employing specific conversion cofactors: palmitoyl-oleoyl-phosphatidylglycerol (POPG) and RNA.
Main Results:
- POPG induced significant structural alterations in PrP, affecting α helices and β strands.
- RNA addition led to increased exposure of the PrP N terminus.
- Conversion to infectious PrP(Sc) showed decreased solvent exposure but retained cofactor-induced features.
Conclusions:
- Cofactor molecules initiate major structural rearrangements in PrP.
- Prion formation is a dynamic sequence of conformational changes.
- These cofactor-driven changes are critical for generating biologically active prions.
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