Related Experiment Video
Updated: May 7, 2026

A Rapid In Vivo Bioassay for Developmentally Active Enhancers
β-Actin knock-out mouse embryonic fibroblasts show increased expression of LIM-, CH-, EFh-domain containing proteins
Christophe Ampe1, Jelle Libbrecht, Marleen Van Troys
1Department of Biochemistry, Faculty of Medicine and Health Sciences, Ghent University, Ghent.
Abstract:
β-actin depletion from mouse embryonic fibroblasts results in an altered transcriptional response rendering these cells a myofibroblast like phenotype. The proteins and upstream regulatory factors responsible for this acquired phenotype, with prominent focal adhesions and stress fibres, are unknown. Data-mining of the changed proteome revealed that actin binding proteins associated with stress fiber or focal adhesion formation are overexpressed in the β-actin knock-out cells and that many of these contain CH-, LIM- or EFh- domains. Furthermore in silico analysis predicts potential common upstream regulators that may, at least partly, coordinate the altered transcriptional response.

