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The Global Genome Biodiversity Network (GGBN) Data Portal
Gabriele Droege1, Katharine Barker, Jonas J Astrin
1Botanic Garden and Botanical Museum Berlin-Dahlem, Freie Universität Berlin, Berlin 14195, Germany, National Museum of Natural History Smithsonian Institution, Washington DC 20013, USA, Zoological Research Museum Alexander Koenig, Bonn 53113, Germany, Wildlife & Environment Society of South Africa, Pretoria 0001, South Africa, National Herbarium of Victoria, Royal Botanic Gardens Melbourne, South Yarra, VIC 3141, Australia, Molecular Systematics Section, Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK, Systematic Botany, Justus-Liebig-Universität, Giessen 35392, Germany, Global Biodiversity Information Facility (GBIF), Copenhagen Ø DK-2100, Denmark, Department of Zoology, The Natural History Museum, London SW7 5BD, UK, Natural History Museum of Denmark, Copenhagen K DK-1307, Denmark and Smithsonian Tropical Research Institute, Balboa Ancon, Unit 0948, Panama.
The Global Genome Biodiversity Network (GGBN) enhances biodiversity research by improving access to DNA samples. It connects repositories, aiding genome sequencing and conservation efforts.
Area of Science:
- Genomics
- Biodiversity Science
- Bioinformatics
Background:
- The Global Genome Biodiversity Network (GGBN) was established in 2011 to improve discoverability of biodiversity DNA and tissue samples.
- Access to high-quality, well-documented, and vouchered samples is crucial for advancing genome sequencing projects.
- A lack of standardized methods for accessing genomic samples presents a significant bottleneck for biodiversity research and conservation.
Purpose of the Study:
- To establish a networked community of biodiversity repositories for enhanced data accessibility.
- To bridge the gap between biodiversity repositories, sequence databases, and research outcomes.
- To promote standardized methods for collections stewardship, information sharing, and ethical sample use.
Main Methods:
- Development and maintenance of the GGBN Data Portal (http://data.ggbn.org) for linking distributed databases.
- Facilitating collaboration among biodiversity biobank-holding institutions worldwide.
- Supporting the coordinated expansion of biodiversity biobanks through standardized practices.
Main Results:
- The GGBN Data Portal provides a centralized access point to globally distributed biodiversity genomic resources.
- Increased discoverability of DNA and tissue samples supports ambitious genome sequencing projects.
- GGBN promotes excellence in collections stewardship and ethical use of biodiversity samples.
Conclusions:
- GGBN is essential for enabling accessibility and coordinated expansion of global biodiversity biobanks.
- Standardized collaboration is critical for overcoming sample access bottlenecks in biodiversity research.
- GGBN facilitates the responsible use of genomic resources for conservation and scientific advancement.
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