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Updated: May 6, 2026

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A linkage map for sugi (Cryptomeria japonica) based on RFLP, RAPD, and isozyme loci.

Y Mukai1, Y Suyama, Y Tsumura

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A genetic linkage map for sugi was created using RFLP, RAPD, and isozyme markers. This map aids in understanding the genetic basis of heartwood color and reveals distorted segregation patterns.

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Area of Science:

  • Forest genetics
  • Molecular genetics
  • Plant breeding

Background:

  • Heartwood color is an important trait in sugi (Cryptomeria japonica) for timber quality.
  • Understanding the genetic architecture of heartwood color requires robust genetic mapping.

Purpose of the Study:

  • To construct a high-density genetic linkage map for sugi.
  • To identify genes and markers associated with heartwood color inheritance.

Main Methods:

  • Utilized restriction fragment length polymorphism (RFLP), random amplified polymorphic DNA (RAPD), and isozyme markers.
  • Employed a three-generation pedigree for linkage analysis.
  • Segregated 164 loci across 73 progeny.

Main Results:

  • Developed a linkage map comprising 145 loci distributed into 20 linkage groups.
  • Assigned 91 loci to 13 linkage groups, spanning 887.3 centimorgans (cM).
  • Observed clustering of markers with distorted segregation in 6 linkage groups, indicating potential genetic phenomena.

Conclusions:

  • The constructed linkage map provides a valuable tool for future genetic studies in sugi.
  • Distorted segregation patterns suggest complex genetic interactions influencing marker inheritance.
  • Further research can leverage this map to pinpoint genes controlling heartwood color.