Related Experiment Video
Updated: Jan 30, 2026

Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Fyn kinase regulates type II PtdIns 4-kinases in RBL 2H3 cells
Naveen Bojjireddy1, Ranjeet Kumar Sinha, Gosukonda Subrahmanyam
1Department of Biosciences and Bioengineering, Wadhwani Research Centre for Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai, 400076, India, naveenb@u.washington.edu.
Abstract:
Type II phosphatidylinositol 4-kinases are implicated in FcεRI-mediated signaling cascades leading to release of inflammatory molecules. Cross-linking of FcεRI on RBL 2H3 cells results in protein tyrosine phosphorylation and activation of type II PtdIns 4-kinase activity. Protein tyrosine kinase(s) that phosphorylate type II PtdIns 4-kinase(s) in RBL 2H3 cells remains elusive and is being addressed in this manuscript. Anti-Fyn kinase antibodies co-immunoprecipitated type II PtdIns 4-kinase activity from FcεRI cross-linked RBL 2H3 cells. In reciprocal assays, His-tagged types II PtdIns 4-kinases were shown to pull down Fyn kinase. Further, anti-Fyn immunoprecipitates were shown to phosphorylate type II PtdIns 4-kinase α and β in in vitro assays. Pull down studies with GST-Fyn-SH2 and GST-Fyn-SH3 domains showed that type II PtdIns 4-kinases associate with Fyn-SH2 domain. Knockdown of Fyn kinase in RBL 2H3 cells abrogated activation of type II PtdIns 4-kinase activity in response to FcεRI cross-linking and type II PtdIns 4-kinase activity in anti-phosphotyrosine immunoprecipitates. Knockdown of Fyn kinase was also strongly correlated with a reduction in β-hexosaminidase release in response to FcεRI cross-linking. These results suggest that type II PtdIns 4-kinases act downstream of Fyn kinase in FcεRI signaling cascades and are regulated by Fyn kinase.
Insights
Fyn kinase phosphorylates type II phosphatidylinositol 4-kinases (PI4Ks) in FcεRI signaling. This interaction regulates PI4K activity and inflammatory mediator release, identifying Fyn kinase as a key regulator.
Area of Science:
- Immunology
- Cell Signaling
- Biochemistry
Background:
- Type II phosphatidylinositol 4-kinases (PI4Ks) are involved in FcεRI-mediated signaling, which triggers the release of inflammatory molecules.
- Activation of PI4Ks occurs downstream of FcεRI cross-linking, involving protein tyrosine phosphorylation, but the specific kinases remain unidentified.
Purpose of the Study:
- To identify the protein tyrosine kinase(s) responsible for phosphorylating type II PI4Ks in RBL 2H3 cells following FcεRI cross-linking.
- To elucidate the role of Fyn kinase in the activation of type II PI4Ks and subsequent inflammatory responses.
Main Methods:
- Co-immunoprecipitation assays using anti-Fyn kinase antibodies and His-tagged PI4Ks.
- In vitro kinase assays using anti-Fyn immunoprecipitates and PI4K α and β.
- Pull-down assays utilizing GST-Fyn-SH2 and GST-Fyn-SH3 domains.
- Fyn kinase knockdown in RBL 2H3 cells followed by FcεRI cross-linking.
Main Results:
- Fyn kinase was identified as a kinase that phosphorylates type II PI4Ks (α and β) in vitro.
- Type II PI4Ks associate with the Fyn-SH2 domain.
- Knockdown of Fyn kinase abolished PI4K activation and reduced inflammatory mediator (β-hexosaminidase) release upon FcεRI cross-linking.
Conclusions:
- Fyn kinase directly phosphorylates and regulates type II PI4Ks in FcεRI signaling pathways.
- Type II PI4Ks function downstream of Fyn kinase in FcεRI-mediated inflammatory responses.
Related Concept Videos
Protein Kinases and Phosphatases
Protein kinases
Many proteins in the cell are regulated by phosphorylation, the addition of a phosphate group. A family of enzymes called kinases...
Protein Kinases and Phosphatases
Receptor Tyrosine Kinases
cAMP-dependent Protein Kinase Pathways
Positive Regulator Molecules
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...

