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Fluorescent Leakage Assay to Investigate Membrane Destabilization by Cell-Penetrating Peptide
Published on: December 19, 2020
riDOM, a cell penetrating peptide. Interaction with phospholipid bilayers
Gabriela Québatte1, Eric Kitas2, Joachim Seelig1
1Biozentrum, University of Basel, Div. of Biophysical Chemistry, Klingelbergstrasse 50/70, CH-4056 Basel, Switzerland.
Abstract:
Melittin is an amphipathic peptide which has received much attention as a model peptide for peptide-membrane interactions. It is however not suited as a transfection agent due to its cytolytic and toxicological effects. Retro-inverso-melittin, when covalently linked to the lipid 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (riDOM), eliminates these shortcomings. The interaction of riDOM with phospholipid membranes was investigated with circular dichroism (CD) spectroscopy, dynamic light scattering, ζ-potential measurements, and high-sensitivity isothermal titration calorimetry. riDOM forms cationic nanoparticles with a diameter of ~13nm which are well soluble in water and bind with high affinity to DNA and lipid membranes. When dissolved in bilayer membranes, riDOM nanoparticles dissociate and form transient pores. riDOM-induced membrane leakiness is however much reduced compared to that of authentic melittin. The secondary structure of the ri-melittin is not changed when riDOM is transferred from water to the membrane and displays a large fraction of β-structure. The (31)P NMR spectrum of the nanoparticle is however transformed into a typical bilayer spectrum. The Gibbs free energy of riDOM binding to bilayer membranes is -8.0 to -10.0kcal/mol which corresponds to the partition energy of just one fatty acyl chain. Half of the hydrophobic surface of the riDOM lipid extension with its 2 oleic acyl chains is therefore involved in a lipid-peptide interaction. This packing arrangement guarantees a good solubility of riDOM both in the aqueous and in the membrane phase. The membrane binding enthalpy is small and riDOM binding is thus entropy-driven.
Insights
Retro-inverso-melittin lipid conjugates (riDOM) form stable nanoparticles that interact with lipid membranes. This peptide-lipid conjugate shows reduced membrane disruption and improved solubility, making it a promising candidate for applications requiring peptide-membrane interactions.
Area of Science:
- Biophysics
- Materials Science
- Biochemistry
Background:
- Melittin, a model peptide for membrane interactions, exhibits significant cytolytic and toxicological effects, limiting its use.
- Retro-inverso-melittin (ri-melittin) offers a modified structure to overcome melittin's limitations.
- Covalent linkage of ri-melittin to 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine (riDOM) aims to improve its properties for membrane interactions.
Purpose of the Study:
- To investigate the interaction of the novel lipid-peptide conjugate, riDOM, with phospholipid membranes.
- To characterize the structural and thermodynamic properties of riDOM in aqueous and membrane environments.
- To assess the potential of riDOM as a safer alternative to melittin for membrane applications.
Main Methods:
- Circular dichroism (CD) spectroscopy to analyze secondary structure.
- Dynamic light scattering and ζ-potential measurements for nanoparticle characterization.
- High-sensitivity isothermal titration calorimetry (ITC) to determine binding thermodynamics.
- (31)P NMR spectroscopy to study membrane structure changes.
Main Results:
- riDOM forms stable, cationic nanoparticles (~13nm diameter) with good water solubility and high affinity for DNA and lipid membranes.
- Upon membrane insertion, riDOM nanoparticles dissociate, forming transient pores with significantly reduced membrane leakiness compared to melittin.
- riDOM insertion into membranes is entropy-driven, with half of its lipid hydrophobic surface involved in lipid-peptide interactions, ensuring dual solubility.
- The β-structure of ri-melittin remains largely unchanged upon transfer to the membrane, while the lipid bilayer structure is preserved.
Conclusions:
- riDOM represents a promising peptide-lipid conjugate with enhanced solubility and reduced toxicity compared to native melittin.
- The unique packing of riDOM within lipid membranes facilitates its dual solubility and controlled membrane interaction.
- riDOM's properties suggest potential applications in areas requiring safe and effective peptide-membrane interactions, such as drug delivery or biomaterials.
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