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Identification of a farnesol analog as a Ras function inhibitor using both an in vivo Ras activation sensor and a
Kamalakkannan Srinivasan1, Thangaiah Subramanian, H Peter Spielmann
1Department of Biological Sciences, Vanderbilt University, Nashville, TN, 37232, USA.
Abstract:
Mutations in Ras isoforms such as K-Ras, N-Ras, and H-Ras contribute to roughly 85, 15, and 1% of human cancers, respectively. Proper membrane targeting of these Ras isoforms, a prerequisite for Ras activity, requires farnesylation or geranylgeranylation at the C-terminal CAAX box. We devised an in vivo screening strategy based on monitoring Ras activation and phenotypic physiological outputs for assaying synthetic Ras function inhibitors (RFI). Ras activity was visualized by the translocation of RBD Raf1 -GFP to activated Ras at the plasma membrane. By using this strategy, we screened one synthetic farnesyl substrate analog (AGOH) along with nine putative inhibitors and found that only m-CN-AGOH inhibited Ras activation. Phenotypic analysis of starving cells could be used to monitor polarization, motility, and the inability of these treated cells to aggregate properly during fruiting body formation. Incorporation of AGOH and m-CN-AGOH to cellular proteins was detected by western blot. These screening assays can be incorporated into a high throughput screening format using Dictyostelium discoideum and automated microscopy to determine effective RFIs. These RFI candidates can then be further tested in mammalian systems.
Insights
Researchers developed a new method to screen for Ras function inhibitors (RFIs) that target cancer-driving Ras proteins. The study identified m-CN-AGOH as a promising RFI candidate by monitoring Ras activation and cell behavior in vivo.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- Ras proteins (K-Ras, N-Ras, H-Ras) are crucial in human cancers, with mutations driving ~85% of cases.
- Ras activity depends on membrane localization, facilitated by farnesylation or geranylgeranylation of the C-terminal CAAX box.
Purpose of the Study:
- To develop and validate an in vivo screening strategy for identifying synthetic Ras function inhibitors (RFIs).
- To assess the efficacy of potential RFIs, including a synthetic farnesyl substrate analog (AGOH) and related compounds.
Main Methods:
- Utilized a screening strategy monitoring Ras activation via Raf1-GFP translocation to the plasma membrane.
- Assessed phenotypic outputs such as cell polarization, motility, and aggregation during fruiting body formation.
- Confirmed compound incorporation into cellular proteins using western blot analysis.
Main Results:
- Identified m-CN-AGOH as the sole effective inhibitor of Ras activation among the tested compounds.
- Observed impaired cell polarization, motility, and aggregation in cells treated with AGOH and m-CN-AGOH.
- Demonstrated the potential for high-throughput screening using Dictyostelium discoideum and automated microscopy.
Conclusions:
- The developed in vivo screening assays are effective for identifying novel RFIs.
- m-CN-AGOH shows promise as an RFI candidate for further investigation in mammalian systems.
- This approach facilitates the discovery of targeted cancer therapies by inhibiting Ras signaling pathways.
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