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Published on: August 23, 2019
DNA methylation of MAPK signal-inhibiting genes in papillary thyroid carcinoma
Eun Kyung Lee1, Ki-Wook Chung, Sun Kyung Yang
1Division of Endocrine surgery, Department of Surgery, Asan Medical Center, 88, Olympic-ro 43-gil, Songpa-gu, Seoul, 138-736, Korea. surgeonckw@amc.seoul.kr.
Background:
The purpose of this study was to identify the DNA methylation status of the mitogen-activated protein kinase (MAPK) signal-inhibiting genes dual-specificity phosphatase 4 (DUSP4) and 6 (DUSP6); and serpin peptidase inhibitor A member 5 (SERPINA5) in thyroid cancer.
Materials And Methods:
Using 76 papillary thyroid cancer(PTC) tissues and three thyroid cancer cell lines (TPC1, WRO82-1 and XTC), the expression of three genes and DNA methylation were determined by reverse transcription-PCR and methylation-specific PCR.
Results:
In all cell lines, the expression of DUSP4 and DUSP6 increased; the corresponding gene promoters were unmethylated. However, SERPINA5 gene expression decreased and SERPINA5 DNA was methylated in the TPC1 cell line. With the de-methylating agent 5'-aza-2'-deoxycytidine, SERPINA5 gene expression was restored. In 82.9% of PTC tissues (63/76), the SERPINA5 DNA promoter was methylated, which was associated with a higher v-raf murine sarcoma viral oncogene homolog B1(BRAF) mutation rate in PTC tissues based on multivariate regression (odds ratio=3.573; 95% confidence interval=1.122-11.379; p=0.031).
Conclusion:
The expression of the MAPK signal-inhibiting gene SERPINA5 decreased in the TPC1 cell line, SERPINA5 expression was regulated by DNA methylation, which was associated with a higher BRAF mutation rate in PTC.
Insights
DNA methylation impacts gene expression in thyroid cancer. SERPINA5 (serpin peptidase inhibitor A member 5) methylation was linked to BRAF mutations in papillary thyroid cancer (PTC).
Area of Science:
- Oncology
- Molecular Biology
- Epigenetics
Background:
- Thyroid cancer, particularly papillary thyroid cancer (PTC), is a significant health concern.
- Understanding the molecular mechanisms, including epigenetic alterations, is crucial for diagnosis and treatment.
- Mitogen-activated protein kinase (MAPK) signaling pathways are frequently dysregulated in various cancers.
Purpose of the Study:
- To investigate the DNA methylation status of key MAPK signal-inhibiting genes: dual-specificity phosphatase 4 (DUSP4), dual-specificity phosphatase 6 (DUSP6), and serpin peptidase inhibitor A member 5 (SERPINA5) in thyroid cancer.
- To determine the relationship between the methylation status of these genes and their expression levels in thyroid cancer.
- To explore the association between SERPINA5 methylation and specific genetic mutations, such as BRAF, in papillary thyroid cancer.
Main Methods:
- Analysis of 76 papillary thyroid cancer (PTC) tissues and three human thyroid cancer cell lines (TPC1, WRO82-1, XTC).
- Gene expression profiling using reverse transcription-polymerase chain reaction (RT-PCR).
- DNA methylation analysis using methylation-specific PCR (MSP).
- Treatment with a demethylating agent (5'-aza-2'-deoxycytidine) to assess functional impact on gene expression.
Main Results:
- DUSP4 and DUSP6 exhibited increased expression with unmethylated promoter regions in all tested cell lines.
- SERPINA5 gene expression was decreased and its promoter DNA was methylated in the TPC1 cell line.
- Demethylation treatment restored SERPINA5 gene expression, confirming a regulatory role of DNA methylation.
- In 82.9% of PTC tissues, SERPINA5 promoter DNA was methylated.
- SERPINA5 promoter methylation was significantly associated with a higher rate of BRAF mutations in PTC tissues (OR=3.573, p=0.031).
Conclusions:
- SERPINA5, a MAPK signal-inhibiting gene, shows decreased expression in thyroid cancer cells, regulated by DNA methylation.
- DNA methylation of the SERPINA5 promoter is a frequent event in papillary thyroid cancer.
- SERPINA5 promoter methylation is associated with an increased prevalence of BRAF mutations in PTC, suggesting a potential link in oncogenesis.
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