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Updated: May 5, 2026

Detection of MicroRNAs in Microglia by Real-time PCR in Normal CNS and During Neuroinflammation
Published on: July 23, 2012
MicroRNA-29b modulates Japanese encephalitis virus-induced microglia activation by targeting tumor necrosis factor
Menaka Chanu Thounaojam1, Deepak Kumar Kaushik, Kiran Kundu
1National Brain Research Centre, Manesar, Haryana, India.
Abstract:
Japanese encephalitis virus (JEV), a single-stranded RNA (ssRNA) virus, is the leading cause of encephalitis in Asia. Microglial activation is one of the key events in JEV-induced neuroinflammation. Although the various microRNAs (miRNAs) has been shown to regulate microglia activation during pathological conditions including neuroviral infections, till date, the involvement of miRNAs in JEV infection has not been evaluated. Hence, we sought to evaluate the possible role of miRNAs in mediating JEV-induced microglia activation. Initial screening revealed significant up-regulation of miR-29b in JEV-infected mouse microglial cell line (BV-2) and primary microglial cells. Furthermore, using bioinformatics tools, we identified tumor necrosis factor alpha-induced protein 3, a negative regulator of nuclear factor-kappa B signaling as a potential target of miR-29b. Interestingly, in vitro knockdown of miR-29b resulted in significant over-expression of tumor necrosis factor alpha-induced protein 3, and subsequent decrease in nuclear translocation of pNF-κB. JEV infection in BV-2 cell line elevated inducible nitric oxide synthase, cyclooxygenase-2, and pro-inflammatory cytokine expression levels, which diminished after miR-29b knockdown. Collectively, our study demonstrates involvement of miR-29b in regulating JEV- induced microglial activation.
Insights
MicroRNAs regulate brain inflammation during Japanese encephalitis virus (JEV) infection. This study found miR-29b controls JEV-induced microglial activation by targeting a key inflammatory pathway.
Area of Science:
- Neuroscience
- Virology
- Molecular Biology
Background:
- Japanese encephalitis virus (JEV) is a major cause of encephalitis in Asia.
- Microglial activation is central to JEV-induced neuroinflammation.
- The role of microRNAs (miRNAs) in JEV infection-related microglial activation is unknown.
Purpose of the Study:
- To investigate the role of miRNAs in JEV-induced microglial activation.
- To identify specific miRNAs involved in this process.
Main Methods:
- Screening of miRNAs in JEV-infected mouse microglial cell lines (BV-2) and primary cells.
- Bioinformatic analysis to predict miRNA targets.
- In vitro knockdown of identified miRNAs.
- Analysis of inflammatory marker expression (iNOS, COX-2, cytokines) and NF-κB signaling.
Main Results:
- miR-29b was significantly upregulated in JEV-infected microglia.
- Tumor necrosis factor alpha-induced protein 3 (TNFAIP3) was identified as a miR-29b target.
- Knockdown of miR-29b increased TNFAIP3 expression and reduced pNF-κB nuclear translocation.
- miR-29b knockdown diminished JEV-induced expression of iNOS, COX-2, and pro-inflammatory cytokines.
Conclusions:
- miR-29b plays a critical role in regulating JEV-induced microglial activation.
- This miRNA modulates neuroinflammation by targeting the TNFAIP3/NF-κB pathway.
- Findings suggest miR-29b as a potential therapeutic target for JEV encephalitis.
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