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Updated: May 5, 2026

JUMPn: A Streamlined Application for Protein Co-Expression Clustering and Network Analysis in Proteomics
Published on: October 19, 2021
Bioinformatics analysis of protein interaction networks: statistics, topologies, and meeting the standards of
V P Bulgakov1, G Sh Tsitsiashvili
1Institute of Biology and Soil Sciences, Far East Branch of the Russian Academy of Sciences, Vladivostok, 690022, Russia. bulgakov@ibss.dvo.ru.
Abstract:
In recent years, bioinformatics analyses of protein networks have allowed researchers to obtain exceptional theoretical predictions and subsequent experimental confirmations. The current view is that protein networks are scale-free networks and have a topology analogous to that of transport networks, the Internet, and social networks. However, an alternative hypothesis exists in which protein networks and scale-free networks possess significantly different properties. In this work, we show that existing information is insufficient to describe protein networks as scale-free networks.
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