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Comprehending renin inhibitor's binding affinity using structure-based approaches
Govindan Subramanian1, Shashidhar N Rao
1VMRD Global Discovery, Zoetis, 333 Portage Street, Kalamazoo, MI 49007, USA.
Abstract:
The performance of several structure-based design (SBD) approaches in predicting the binding affinity of diverse small molecule inhibitors co-crystallized to human renin was assessed to ascertain the modeling tool and method of choice required when dealing with structure-based lead optimization projects. Most of the SBD approaches investigated here were able to provide qualitative guidance, but quantitative accuracy as well as decisive discrimination between [in]actives is still not within reach. Such an outcome suggests that the current methods need improvement to capture the overall physics of the binding phenomenon for consistent applications in a lead optimization setting.
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