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DNA Virus Detection System Based on RPA-CRISPR/Cas12a-SPM and Deep Learning
Published on: May 10, 2024
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Ultrasensitive norovirus detection using DNA aptasensor technology.
Amanda Giamberardino1, Mahmoud Labib, Eman M Hassan
1Department of Chemistry, Carleton University, Steacie Building, Ottawa, Ontario, Canada.
Plos One
|November 19, 2013
Summary
Researchers developed a DNA aptamer, AG3, that strongly binds to noroviruses. This aptamer, when used in an electrochemical sensor, can detect murine norovirus (MNV) for potential on-site applications.
Area of Science:
- Biotechnology
- Molecular Biology
- Biosensing
Background:
- Norovirus (NoV) infections cause significant gastroenteritis globally.
- Rapid and sensitive detection methods for noroviruses are crucial for public health surveillance and outbreak control.
Purpose of the Study:
- To develop and characterize high-affinity DNA aptamers against noroviruses.
- To create a novel aptasensor for the detection of noroviruses.
Main Methods:
- Systematic Evolution of Ligands by EXponential enrichment (SELEX) was employed to identify DNA aptamers against murine norovirus (MNV).
- Fluorescence anisotropy was used to determine the binding affinity of the selected aptamer (AG3).
- An electrochemical aptasensor was constructed using gold nanoparticle-modified screen-printed carbon electrodes (GNPs-SPCE) incorporating the AG3 aptamer.
Main Results:
- The aptamer AG3 demonstrated high affinity for MNV in the low picomolar range.
- AG3 showed cross-reactivity with a human norovirus (HuNoV) strain (GII.3) and high specificity compared to feline calicivirus (FCV).
- The developed aptasensor detected MNV with a limit of detection of approximately 180 virus particles.
Conclusions:
- The DNA aptamer AG3 is a promising candidate for norovirus detection due to its high affinity and specificity.
- The aptasensor platform offers a sensitive and rapid method for potential on-site detection of noroviruses in environmental and clinical samples.

