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Updated: May 5, 2026

Three-dimensional Quantification of Intestinal Mucus Using Whole-mount Tissue Imaging
Published on: September 12, 2025
Mucus and the goblet cell
Malin E V Johansson1, Gunnar C Hansson
1Department of Medical Biochemistry, University of Gothenburg, Gothenburg, Sweden.
Abstract:
The discovery of an inner mucus layer normally impervious to bacteria has changed our way of understanding the interaction between commensal bacteria and the host epithelial cells. This inner colon mucus layer is rapidly renewed and converted into the outer mucus layer by host controlled endogenous proteolytic processing. The mucus characteristics esteem from the properties of the main protein component of these layers, the MUC2 mucin. This forms an enormously large net-like structure that builds the laminated inner mucus layer that largely acts as a size exclusion filter excluding bacteria. In the absence of MUC2 mucin, there is no inner mucus layer and bacteria reach the epithelial cell surface, penetrate the crypts and are also found inside epithelial cells, something that leads to severe inflammation. Other mouse models that spontaneously develop colitis due to different defects, like an absent ion channel (Nhe3) or immunological mediators (Tlr5, IL-10), all also have a defective inner colon mucus layer. Human patients with active ulcerative colitis have this layer penetrable to bacteria and beads the size of bacteria. Some of the ulcerative colitis patients in remission have a normal mucus layer whereas others have a penetrable inner mucus layer. Together, this suggests that the inner mucus layer and its integrity is important for the protection of the colon epithelium and inhibiting activation of the immune system as in ulcerative colitis.
Insights
The colon
Area of Science:
- Gastroenterology and Immunology
Background:
- A protective inner mucus layer in the colon, primarily composed of MUC2 mucin, normally prevents bacterial interaction with epithelial cells.
- This mucus layer is crucial for maintaining gut homeostasis and is rapidly renewed through host-controlled processing.
- Defects in this inner mucus layer are associated with severe inflammation and disease states.
Purpose of the Study:
- To investigate the role of the inner colon mucus layer in host-bacterial interactions and its implications in inflammatory conditions.
- To understand the structural and functional significance of MUC2 mucin in maintaining colon epithelial integrity.
Main Methods:
- Analysis of MUC2 mucin's role in forming the inner mucus layer's structure.
- Examination of mouse models with genetic defects affecting mucus layer integrity.
- Comparison of mucus layer status in human patients with active ulcerative colitis and those in remission.
Main Results:
- Absence of MUC2 mucin leads to a lack of the inner mucus layer, allowing bacteria to reach and penetrate epithelial cells, causing inflammation.
- Mouse models with defects in ion channels (Nhe3) or immune mediators (Tlr5, IL-10) also exhibit a defective inner mucus layer.
- Human ulcerative colitis patients show a penetrable mucus layer, while some in remission have a restored layer.
Conclusions:
- The integrity of the inner colon mucus layer is vital for protecting the colon epithelium from bacterial invasion.
- A compromised inner mucus layer is implicated in the pathogenesis of ulcerative colitis by allowing immune system activation.
- Maintaining a functional inner mucus layer is critical for preventing colon inflammation.
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