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Updated: May 5, 2026

Kinetic Screening of Nuclease Activity using Nucleic Acid Probes
Published on: November 1, 2019
Nucleic acid aptamers stabilize proteins against different types of stress conditions
Hardik C Jetani1, Ankan Kumar Bhadra, Nishant Kumar Jain
1Department of Biotechnology, National Institute of Pharmaceutical Education and Research (NIPER), Punjab, 160 062, India.
Abstract:
It has been observed that the same osmolyte cannot provide protection to a protein exposed to more than one stress condition. We wanted to study the effect of nucleic acid aptamers on the stabilization of proteins against a variety of stress conditions. Adjuvanted tetanus toxoid was exposed to thermal, freeze-thawing, and agitation stress. The stability and antigenicity of the toxoid were measured. Using nucleic acid aptamers selected against tetanus toxoid, we show that these specific RNA sequences were able to stabilize alumina-adsorbed tetanus toxoid against thermal-, agitation-, and freeze-thawing-induced stress. Binding affinity of the aptamer-protein complex did not show any significant change at elevated temperature as compared with that at room temperature, indicating that the aptamer protected the protein by remaining bound to it under stress conditions and did not allow either the protein to unfold or to promote protein-protein interaction. Thus, we show that by changing the stabilization strategy from a solvent-centric to a protein-centric approach, the same molecule can be employed as a stabilizer against more than one stress condition and thus probably reduce the cost of the product during its formulation.
Insights
Nucleic acid aptamers stabilize tetanus toxoid against multiple stresses like heat and freezing. This protein-centric approach offers a versatile solution for vaccine formulation, potentially reducing costs.
Area of Science:
- Biochemistry
- Molecular Biology
- Vaccine Development
Background:
- Traditional protein stabilizers (osmolytes) are often specific to single stress conditions.
- Developing stabilizers effective against multiple stresses is crucial for robust vaccine formulation.
Purpose of the Study:
- To investigate the efficacy of nucleic acid aptamers in stabilizing proteins against diverse stress conditions.
- To evaluate the protein-centric stabilization approach for vaccine applications.
Main Methods:
- Tetanus toxoid was subjected to thermal, freeze-thawing, and agitation stresses.
- Nucleic acid aptamers specific to tetanus toxoid were utilized.
- Protein stability and antigenicity were assessed under various stress conditions.
Main Results:
- Specific RNA aptamers successfully stabilized alumina-adsorbed tetanus toxoid against thermal, agitation, and freeze-thawing stress.
- Aptamer-protein binding affinity remained stable at elevated temperatures, indicating sustained protection.
- Aptamers prevented protein unfolding and aggregation under stress.
Conclusions:
- Nucleic acid aptamers provide a versatile protein-centric stabilization strategy effective against multiple stresses.
- This approach enhances protein stability in vaccine formulations and may reduce manufacturing costs.
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